Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC25.54■■□□□ 1.68
CTDP1Q9Y5B0 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CTDP1Q9Y5B0 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
CTDP1Q9Y5B0 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC25.53■■□□□ 1.68
CTDP1Q9Y5B0 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
CTDP1Q9Y5B0 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC25.53■■□□□ 1.68
CTDP1Q9Y5B0 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC25.53■■□□□ 1.68
CTDP1Q9Y5B0 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC25.53■■□□□ 1.68
CTDP1Q9Y5B0 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
CTDP1Q9Y5B0 AL031602.1-201ENST00000633169 911 ntBASIC25.53■■□□□ 1.68
CTDP1Q9Y5B0 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC25.53■■□□□ 1.68
CTDP1Q9Y5B0 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
CTDP1Q9Y5B0 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
CTDP1Q9Y5B0 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
CTDP1Q9Y5B0 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
CTDP1Q9Y5B0 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
CTDP1Q9Y5B0 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
CTDP1Q9Y5B0 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC25.52■■□□□ 1.68
CTDP1Q9Y5B0 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
CTDP1Q9Y5B0 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
CTDP1Q9Y5B0 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC25.52■■□□□ 1.68
CTDP1Q9Y5B0 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
CTDP1Q9Y5B0 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC25.52■■□□□ 1.68
CTDP1Q9Y5B0 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
CTDP1Q9Y5B0 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC25.52■■□□□ 1.68
CTDP1Q9Y5B0 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC25.52■■□□□ 1.68
CTDP1Q9Y5B0 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
CTDP1Q9Y5B0 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
CTDP1Q9Y5B0 AL353803.4-201ENST00000565882 1934 ntBASIC25.51■■□□□ 1.67
CTDP1Q9Y5B0 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC25.51■■□□□ 1.67
CTDP1Q9Y5B0 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
CTDP1Q9Y5B0 HACD1-201ENST00000326961 773 ntTSL 2 BASIC25.51■■□□□ 1.67
CTDP1Q9Y5B0 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
CTDP1Q9Y5B0 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
CTDP1Q9Y5B0 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC25.51■■□□□ 1.67
CTDP1Q9Y5B0 MPST-204ENST00000404393 1329 ntTSL 5 BASIC25.51■■□□□ 1.67
CTDP1Q9Y5B0 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC25.51■■□□□ 1.67
CTDP1Q9Y5B0 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
CTDP1Q9Y5B0 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
CTDP1Q9Y5B0 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
CTDP1Q9Y5B0 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC25.5■■□□□ 1.67
CTDP1Q9Y5B0 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC25.5■■□□□ 1.67
CTDP1Q9Y5B0 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
CTDP1Q9Y5B0 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC25.5■■□□□ 1.67
CTDP1Q9Y5B0 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC25.5■■□□□ 1.67
CTDP1Q9Y5B0 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
CTDP1Q9Y5B0 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
CTDP1Q9Y5B0 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC25.49■■□□□ 1.67
CTDP1Q9Y5B0 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC25.49■■□□□ 1.67
CTDP1Q9Y5B0 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
CTDP1Q9Y5B0 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
CTDP1Q9Y5B0 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC25.49■■□□□ 1.67
CTDP1Q9Y5B0 NT5C3AP1-201ENST00000394500 1012 ntBASIC25.49■■□□□ 1.67
CTDP1Q9Y5B0 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC25.49■■□□□ 1.67
CTDP1Q9Y5B0 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC25.49■■□□□ 1.67
CTDP1Q9Y5B0 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
CTDP1Q9Y5B0 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
CTDP1Q9Y5B0 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
CTDP1Q9Y5B0 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
CTDP1Q9Y5B0 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC25.48■■□□□ 1.67
CTDP1Q9Y5B0 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
CTDP1Q9Y5B0 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC25.48■■□□□ 1.67
CTDP1Q9Y5B0 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC25.48■■□□□ 1.67
CTDP1Q9Y5B0 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC25.48■■□□□ 1.67
CTDP1Q9Y5B0 LINC02228-203ENST00000641970 1355 ntBASIC25.48■■□□□ 1.67
CTDP1Q9Y5B0 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
CTDP1Q9Y5B0 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
CTDP1Q9Y5B0 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC25.48■■□□□ 1.67
CTDP1Q9Y5B0 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC25.48■■□□□ 1.67
CTDP1Q9Y5B0 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC25.48■■□□□ 1.67
CTDP1Q9Y5B0 AC087239.1-201ENST00000622671 572 ntBASIC25.48■■□□□ 1.67
CTDP1Q9Y5B0 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC25.48■■□□□ 1.67
CTDP1Q9Y5B0 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
CTDP1Q9Y5B0 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC25.48■■□□□ 1.67
CTDP1Q9Y5B0 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC25.48■■□□□ 1.67
CTDP1Q9Y5B0 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
CTDP1Q9Y5B0 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
CTDP1Q9Y5B0 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC25.48■■□□□ 1.67
CTDP1Q9Y5B0 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC25.48■■□□□ 1.67
CTDP1Q9Y5B0 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC25.47■■□□□ 1.67
CTDP1Q9Y5B0 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
CTDP1Q9Y5B0 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC25.47■■□□□ 1.67
CTDP1Q9Y5B0 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
CTDP1Q9Y5B0 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC25.47■■□□□ 1.67
CTDP1Q9Y5B0 KRT18P5-201ENST00000436075 1291 ntBASIC25.47■■□□□ 1.67
CTDP1Q9Y5B0 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC25.47■■□□□ 1.67
CTDP1Q9Y5B0 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC25.47■■□□□ 1.67
CTDP1Q9Y5B0 DUX4L2-201ENST00000561772 1275 ntBASIC25.47■■□□□ 1.67
CTDP1Q9Y5B0 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC25.47■■□□□ 1.67
CTDP1Q9Y5B0 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC25.47■■□□□ 1.67
CTDP1Q9Y5B0 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC25.47■■□□□ 1.67
CTDP1Q9Y5B0 DUX4L6-201ENST00000626483 1275 ntBASIC25.47■■□□□ 1.67
CTDP1Q9Y5B0 DUX4L1-201ENST00000627662 1275 ntBASIC25.47■■□□□ 1.67
CTDP1Q9Y5B0 DUX4L8-201ENST00000629013 1275 ntBASIC25.47■■□□□ 1.67
CTDP1Q9Y5B0 DUX4L3-201ENST00000630187 1275 ntBASIC25.47■■□□□ 1.67
CTDP1Q9Y5B0 DUX4L7-201ENST00000630678 1275 ntBASIC25.47■■□□□ 1.67
CTDP1Q9Y5B0 DUX4L5-201ENST00000630834 1275 ntBASIC25.47■■□□□ 1.67
CTDP1Q9Y5B0 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
CTDP1Q9Y5B0 RARA-203ENST00000394086 2008 ntTSL 2 BASIC25.47■■□□□ 1.67
CTDP1Q9Y5B0 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms