Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LINC00588Q9Y4M8 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
LINC00588Q9Y4M8 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
LINC00588Q9Y4M8 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
LINC00588Q9Y4M8 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
LINC00588Q9Y4M8 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC15.13■□□□□ 0.01
LINC00588Q9Y4M8 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LINC00588Q9Y4M8 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC15.13■□□□□ 0.01
LINC00588Q9Y4M8 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
LINC00588Q9Y4M8 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LINC00588Q9Y4M8 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LINC00588Q9Y4M8 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LINC00588Q9Y4M8 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LINC00588Q9Y4M8 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC15.13■□□□□ 0.01
LINC00588Q9Y4M8 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LINC00588Q9Y4M8 PLD4-205ENST00000553861 667 ntTSL 2 BASIC15.13■□□□□ 0.01
LINC00588Q9Y4M8 AC092068.2-201ENST00000590491 1708 ntBASIC15.13■□□□□ 0.01
LINC00588Q9Y4M8 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC15.13■□□□□ 0.01
LINC00588Q9Y4M8 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC15.13■□□□□ 0.01
LINC00588Q9Y4M8 AL358852.1-201ENST00000623174 1268 ntBASIC15.13■□□□□ 0.01
LINC00588Q9Y4M8 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
LINC00588Q9Y4M8 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC15.13■□□□□ 0.01
LINC00588Q9Y4M8 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC15.13■□□□□ 0.01
LINC00588Q9Y4M8 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LINC00588Q9Y4M8 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LINC00588Q9Y4M8 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC15.12■□□□□ 0.01
LINC00588Q9Y4M8 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC15.12■□□□□ 0.01
LINC00588Q9Y4M8 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LINC00588Q9Y4M8 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC15.12■□□□□ 0.01
LINC00588Q9Y4M8 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LINC00588Q9Y4M8 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LINC00588Q9Y4M8 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
LINC00588Q9Y4M8 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LINC00588Q9Y4M8 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC15.12■□□□□ 0.01
LINC00588Q9Y4M8 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LINC00588Q9Y4M8 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC15.12■□□□□ 0.01
LINC00588Q9Y4M8 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC15.12■□□□□ 0.01
LINC00588Q9Y4M8 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC15.12■□□□□ 0.01
LINC00588Q9Y4M8 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LINC00588Q9Y4M8 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC15.12■□□□□ 0.01
LINC00588Q9Y4M8 AC012414.1-201ENST00000556676 535 ntBASIC15.12■□□□□ 0.01
LINC00588Q9Y4M8 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC15.12■□□□□ 0.01
LINC00588Q9Y4M8 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC15.12■□□□□ 0.01
LINC00588Q9Y4M8 MIR6084-201ENST00000622012 110 ntBASIC15.12■□□□□ 0.01
LINC00588Q9Y4M8 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
LINC00588Q9Y4M8 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LINC00588Q9Y4M8 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC15.12■□□□□ 0.01
LINC00588Q9Y4M8 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LINC00588Q9Y4M8 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
LINC00588Q9Y4M8 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LINC00588Q9Y4M8 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LINC00588Q9Y4M8 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
LINC00588Q9Y4M8 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC15.11■□□□□ 0.01
LINC00588Q9Y4M8 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LINC00588Q9Y4M8 LHPP-203ENST00000392757 840 ntTSL 3 BASIC15.11■□□□□ 0.01
LINC00588Q9Y4M8 AL354811.1-201ENST00000610286 706 ntBASIC15.11■□□□□ 0.01
LINC00588Q9Y4M8 ANKRD20A6P-201ENST00000618763 204 ntBASIC15.11■□□□□ 0.01
LINC00588Q9Y4M8 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LINC00588Q9Y4M8 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LINC00588Q9Y4M8 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC15.11■□□□□ 0.01
LINC00588Q9Y4M8 AC093323.1-202ENST00000635031 2045 ntBASIC15.1■□□□□ 0.01
LINC00588Q9Y4M8 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
LINC00588Q9Y4M8 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
LINC00588Q9Y4M8 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC15.1■□□□□ 0.01
LINC00588Q9Y4M8 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LINC00588Q9Y4M8 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
LINC00588Q9Y4M8 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LINC00588Q9Y4M8 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LINC00588Q9Y4M8 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC15.1■□□□□ 0.01
LINC00588Q9Y4M8 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC15.1■□□□□ 0.01
LINC00588Q9Y4M8 AC068587.7-201ENST00000641602 218 ntBASIC15.1■□□□□ 0.01
LINC00588Q9Y4M8 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC15.1■□□□□ 0.01
LINC00588Q9Y4M8 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LINC00588Q9Y4M8 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC15.1■□□□□ 0.01
LINC00588Q9Y4M8 EI24-211ENST00000534546 1544 ntTSL 2 BASIC15.1■□□□□ 0.01
LINC00588Q9Y4M8 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LINC00588Q9Y4M8 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
LINC00588Q9Y4M8 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LINC00588Q9Y4M8 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LINC00588Q9Y4M8 RARA-203ENST00000394086 2008 ntTSL 2 BASIC15.09■□□□□ 0.01
LINC00588Q9Y4M8 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC15.09■□□□□ 0.01
LINC00588Q9Y4M8 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC15.09■□□□□ 0.01
LINC00588Q9Y4M8 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LINC00588Q9Y4M8 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LINC00588Q9Y4M8 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LINC00588Q9Y4M8 YBX1P1-201ENST00000445822 960 ntBASIC15.09■□□□□ 0.01
LINC00588Q9Y4M8 AC105233.4-201ENST00000642045 216 ntBASIC15.09■□□□□ 0.01
LINC00588Q9Y4M8 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LINC00588Q9Y4M8 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
LINC00588Q9Y4M8 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
LINC00588Q9Y4M8 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LINC00588Q9Y4M8 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LINC00588Q9Y4M8 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LINC00588Q9Y4M8 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LINC00588Q9Y4M8 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC15.09■□□□□ 0.01
LINC00588Q9Y4M8 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC15.09■□□□□ 0.01
LINC00588Q9Y4M8 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC15.09■□□□□ 0.01
LINC00588Q9Y4M8 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC15.08■□□□□ 0
LINC00588Q9Y4M8 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC15.08■□□□□ 0
LINC00588Q9Y4M8 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms