Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.95■□□□□ 0.94
CCM2LQ9NUG4 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
CCM2LQ9NUG4 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
CCM2LQ9NUG4 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.95■□□□□ 0.94
CCM2LQ9NUG4 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.95■□□□□ 0.94
CCM2LQ9NUG4 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC20.95■□□□□ 0.94
CCM2LQ9NUG4 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
CCM2LQ9NUG4 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCM2LQ9NUG4 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCM2LQ9NUG4 SLC25A24-204ENST00000569674 2357 ntBASIC20.95■□□□□ 0.94
CCM2LQ9NUG4 AC026310.3-201ENST00000625186 2373 ntBASIC20.95■□□□□ 0.94
CCM2LQ9NUG4 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.95■□□□□ 0.94
CCM2LQ9NUG4 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
CCM2LQ9NUG4 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCM2LQ9NUG4 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
CCM2LQ9NUG4 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.94■□□□□ 0.94
CCM2LQ9NUG4 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCM2LQ9NUG4 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.94■□□□□ 0.94
CCM2LQ9NUG4 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.94■□□□□ 0.94
CCM2LQ9NUG4 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCM2LQ9NUG4 TK2-216ENST00000564917 1156 ntTSL 3 BASIC20.94■□□□□ 0.94
CCM2LQ9NUG4 Z92544.1-202ENST00000571933 1220 ntBASIC20.94■□□□□ 0.94
CCM2LQ9NUG4 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCM2LQ9NUG4 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCM2LQ9NUG4 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCM2LQ9NUG4 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.93■□□□□ 0.94
CCM2LQ9NUG4 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCM2LQ9NUG4 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CCM2LQ9NUG4 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CCM2LQ9NUG4 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
CCM2LQ9NUG4 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC20.93■□□□□ 0.94
CCM2LQ9NUG4 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.93■□□□□ 0.94
CCM2LQ9NUG4 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.93■□□□□ 0.94
CCM2LQ9NUG4 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCM2LQ9NUG4 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.93■□□□□ 0.94
CCM2LQ9NUG4 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.92■□□□□ 0.94
CCM2LQ9NUG4 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCM2LQ9NUG4 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCM2LQ9NUG4 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.92■□□□□ 0.94
CCM2LQ9NUG4 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCM2LQ9NUG4 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.92■□□□□ 0.94
CCM2LQ9NUG4 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CCM2LQ9NUG4 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCM2LQ9NUG4 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCM2LQ9NUG4 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCM2LQ9NUG4 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.91■□□□□ 0.94
CCM2LQ9NUG4 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCM2LQ9NUG4 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CCM2LQ9NUG4 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC20.91■□□□□ 0.94
CCM2LQ9NUG4 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
CCM2LQ9NUG4 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CCM2LQ9NUG4 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CCM2LQ9NUG4 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCM2LQ9NUG4 AC019171.1-201ENST00000601251 1056 ntBASIC20.91■□□□□ 0.94
CCM2LQ9NUG4 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
CCM2LQ9NUG4 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CCM2LQ9NUG4 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCM2LQ9NUG4 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CCM2LQ9NUG4 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCM2LQ9NUG4 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCM2LQ9NUG4 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCM2LQ9NUG4 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.9■□□□□ 0.94
CCM2LQ9NUG4 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC20.9■□□□□ 0.94
CCM2LQ9NUG4 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20.9■□□□□ 0.94
CCM2LQ9NUG4 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.9■□□□□ 0.94
CCM2LQ9NUG4 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCM2LQ9NUG4 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCM2LQ9NUG4 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.9■□□□□ 0.94
CCM2LQ9NUG4 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CCM2LQ9NUG4 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
CCM2LQ9NUG4 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CCM2LQ9NUG4 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC20.89■□□□□ 0.94
CCM2LQ9NUG4 AL353803.4-201ENST00000565882 1934 ntBASIC20.89■□□□□ 0.93
CCM2LQ9NUG4 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.89■□□□□ 0.93
CCM2LQ9NUG4 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.89■□□□□ 0.93
CCM2LQ9NUG4 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.89■□□□□ 0.93
CCM2LQ9NUG4 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
CCM2LQ9NUG4 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCM2LQ9NUG4 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCM2LQ9NUG4 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.89■□□□□ 0.93
CCM2LQ9NUG4 AC087742.1-201ENST00000575880 1738 ntBASIC20.89■□□□□ 0.93
CCM2LQ9NUG4 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCM2LQ9NUG4 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCM2LQ9NUG4 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCM2LQ9NUG4 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
CCM2LQ9NUG4 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCM2LQ9NUG4 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.88■□□□□ 0.93
CCM2LQ9NUG4 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.88■□□□□ 0.93
CCM2LQ9NUG4 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCM2LQ9NUG4 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCM2LQ9NUG4 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.88■□□□□ 0.93
CCM2LQ9NUG4 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCM2LQ9NUG4 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CCM2LQ9NUG4 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCM2LQ9NUG4 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCM2LQ9NUG4 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
CCM2LQ9NUG4 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.87■□□□□ 0.93
CCM2LQ9NUG4 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCM2LQ9NUG4 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.87■□□□□ 0.93
CCM2LQ9NUG4 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms