Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
PRDM9Q9NQV7 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PRDM9Q9NQV7 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PRDM9Q9NQV7 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PRDM9Q9NQV7 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.85■□□□□ 0.93
PRDM9Q9NQV7 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.85■□□□□ 0.93
PRDM9Q9NQV7 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
PRDM9Q9NQV7 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PRDM9Q9NQV7 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.85■□□□□ 0.93
PRDM9Q9NQV7 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PRDM9Q9NQV7 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.85■□□□□ 0.93
PRDM9Q9NQV7 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
PRDM9Q9NQV7 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.85■□□□□ 0.93
PRDM9Q9NQV7 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
PRDM9Q9NQV7 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.85■□□□□ 0.93
PRDM9Q9NQV7 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
PRDM9Q9NQV7 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.84■□□□□ 0.93
PRDM9Q9NQV7 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PRDM9Q9NQV7 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PRDM9Q9NQV7 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
PRDM9Q9NQV7 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PRDM9Q9NQV7 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.84■□□□□ 0.93
PRDM9Q9NQV7 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.84■□□□□ 0.93
PRDM9Q9NQV7 AC005837.3-201ENST00000612163 286 ntBASIC20.84■□□□□ 0.93
PRDM9Q9NQV7 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.84■□□□□ 0.93
PRDM9Q9NQV7 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.84■□□□□ 0.93
PRDM9Q9NQV7 AL355001.2-201ENST00000620617 1191 ntBASIC20.84■□□□□ 0.93
PRDM9Q9NQV7 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PRDM9Q9NQV7 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.84■□□□□ 0.93
PRDM9Q9NQV7 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PRDM9Q9NQV7 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
PRDM9Q9NQV7 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PRDM9Q9NQV7 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PRDM9Q9NQV7 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
PRDM9Q9NQV7 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
PRDM9Q9NQV7 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.83■□□□□ 0.93
PRDM9Q9NQV7 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.83■□□□□ 0.93
PRDM9Q9NQV7 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
PRDM9Q9NQV7 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.83■□□□□ 0.93
PRDM9Q9NQV7 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.83■□□□□ 0.93
PRDM9Q9NQV7 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.83■□□□□ 0.92
PRDM9Q9NQV7 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PRDM9Q9NQV7 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.83■□□□□ 0.92
PRDM9Q9NQV7 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
PRDM9Q9NQV7 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
PRDM9Q9NQV7 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PRDM9Q9NQV7 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PRDM9Q9NQV7 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PRDM9Q9NQV7 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PRDM9Q9NQV7 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.82■□□□□ 0.92
PRDM9Q9NQV7 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.82■□□□□ 0.92
PRDM9Q9NQV7 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.82■□□□□ 0.92
PRDM9Q9NQV7 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PRDM9Q9NQV7 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PRDM9Q9NQV7 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
PRDM9Q9NQV7 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PRDM9Q9NQV7 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.82■□□□□ 0.92
PRDM9Q9NQV7 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PRDM9Q9NQV7 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
PRDM9Q9NQV7 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.82■□□□□ 0.92
PRDM9Q9NQV7 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PRDM9Q9NQV7 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PRDM9Q9NQV7 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.81■□□□□ 0.92
PRDM9Q9NQV7 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
PRDM9Q9NQV7 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PRDM9Q9NQV7 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.81■□□□□ 0.92
PRDM9Q9NQV7 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.81■□□□□ 0.92
PRDM9Q9NQV7 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PRDM9Q9NQV7 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PRDM9Q9NQV7 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.81■□□□□ 0.92
PRDM9Q9NQV7 AL031432.3-201ENST00000607698 485 ntBASIC20.81■□□□□ 0.92
PRDM9Q9NQV7 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PRDM9Q9NQV7 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
PRDM9Q9NQV7 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PRDM9Q9NQV7 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.81■□□□□ 0.92
PRDM9Q9NQV7 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PRDM9Q9NQV7 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PRDM9Q9NQV7 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
PRDM9Q9NQV7 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
PRDM9Q9NQV7 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
PRDM9Q9NQV7 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.8■□□□□ 0.92
PRDM9Q9NQV7 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PRDM9Q9NQV7 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PRDM9Q9NQV7 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.8■□□□□ 0.92
PRDM9Q9NQV7 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PRDM9Q9NQV7 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PRDM9Q9NQV7 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.8■□□□□ 0.92
PRDM9Q9NQV7 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.8■□□□□ 0.92
PRDM9Q9NQV7 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.8■□□□□ 0.92
PRDM9Q9NQV7 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PRDM9Q9NQV7 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
PRDM9Q9NQV7 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PRDM9Q9NQV7 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
PRDM9Q9NQV7 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PRDM9Q9NQV7 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PRDM9Q9NQV7 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
PRDM9Q9NQV7 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PRDM9Q9NQV7 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
PRDM9Q9NQV7 SUDS3P1-201ENST00000505831 966 ntBASIC20.79■□□□□ 0.92
PRDM9Q9NQV7 AC142381.2-201ENST00000566120 298 ntBASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms