Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC26.31■■□□□ 1.8
DDX4Q9NQI0 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC26.31■■□□□ 1.8
DDX4Q9NQI0 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC26.31■■□□□ 1.8
DDX4Q9NQI0 MPST-204ENST00000404393 1329 ntTSL 5 BASIC26.31■■□□□ 1.8
DDX4Q9NQI0 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
DDX4Q9NQI0 LINC02228-203ENST00000641970 1355 ntBASIC26.31■■□□□ 1.8
DDX4Q9NQI0 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
DDX4Q9NQI0 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC26.3■■□□□ 1.8
DDX4Q9NQI0 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC26.3■■□□□ 1.8
DDX4Q9NQI0 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
DDX4Q9NQI0 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC26.3■■□□□ 1.8
DDX4Q9NQI0 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
DDX4Q9NQI0 RARRES2P11-201ENST00000635158 484 ntBASIC26.3■■□□□ 1.8
DDX4Q9NQI0 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC26.3■■□□□ 1.8
DDX4Q9NQI0 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC26.3■■□□□ 1.8
DDX4Q9NQI0 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
DDX4Q9NQI0 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC26.3■■□□□ 1.8
DDX4Q9NQI0 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC26.29■■□□□ 1.8
DDX4Q9NQI0 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
DDX4Q9NQI0 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC26.29■■□□□ 1.8
DDX4Q9NQI0 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC26.29■■□□□ 1.8
DDX4Q9NQI0 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC26.29■■□□□ 1.8
DDX4Q9NQI0 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC26.29■■□□□ 1.8
DDX4Q9NQI0 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC26.29■■□□□ 1.8
DDX4Q9NQI0 NTF6G-201ENST00000591094 616 ntBASIC26.29■■□□□ 1.8
DDX4Q9NQI0 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
DDX4Q9NQI0 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
DDX4Q9NQI0 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC26.29■■□□□ 1.8
DDX4Q9NQI0 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
DDX4Q9NQI0 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
DDX4Q9NQI0 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC26.28■■□□□ 1.8
DDX4Q9NQI0 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
DDX4Q9NQI0 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
DDX4Q9NQI0 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC26.28■■□□□ 1.8
DDX4Q9NQI0 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC26.28■■□□□ 1.8
DDX4Q9NQI0 AL137784.2-201ENST00000607332 1000 ntBASIC26.28■■□□□ 1.8
DDX4Q9NQI0 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
DDX4Q9NQI0 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC26.28■■□□□ 1.8
DDX4Q9NQI0 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC26.28■■□□□ 1.8
DDX4Q9NQI0 EI24-211ENST00000534546 1544 ntTSL 2 BASIC26.28■■□□□ 1.8
DDX4Q9NQI0 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
DDX4Q9NQI0 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC26.27■■□□□ 1.8
DDX4Q9NQI0 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
DDX4Q9NQI0 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC26.27■■□□□ 1.8
DDX4Q9NQI0 KRT18P61-201ENST00000585825 1298 ntBASIC26.27■■□□□ 1.8
DDX4Q9NQI0 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
DDX4Q9NQI0 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC26.27■■□□□ 1.8
DDX4Q9NQI0 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC26.27■■□□□ 1.8
DDX4Q9NQI0 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC26.27■■□□□ 1.8
DDX4Q9NQI0 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
DDX4Q9NQI0 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC26.27■■□□□ 1.8
DDX4Q9NQI0 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
DDX4Q9NQI0 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
DDX4Q9NQI0 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
DDX4Q9NQI0 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
DDX4Q9NQI0 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC26.26■■□□□ 1.79
DDX4Q9NQI0 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC26.26■■□□□ 1.79
DDX4Q9NQI0 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
DDX4Q9NQI0 AC090192.1-201ENST00000517740 490 ntBASIC26.26■■□□□ 1.79
DDX4Q9NQI0 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
DDX4Q9NQI0 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
DDX4Q9NQI0 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
DDX4Q9NQI0 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
DDX4Q9NQI0 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
DDX4Q9NQI0 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC26.25■■□□□ 1.79
DDX4Q9NQI0 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
DDX4Q9NQI0 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC26.25■■□□□ 1.79
DDX4Q9NQI0 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
DDX4Q9NQI0 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
DDX4Q9NQI0 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
DDX4Q9NQI0 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC26.24■■□□□ 1.79
DDX4Q9NQI0 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
DDX4Q9NQI0 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
DDX4Q9NQI0 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC26.24■■□□□ 1.79
DDX4Q9NQI0 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC26.24■■□□□ 1.79
DDX4Q9NQI0 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
DDX4Q9NQI0 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC26.24■■□□□ 1.79
DDX4Q9NQI0 TPRG1LP1-201ENST00000598702 760 ntBASIC26.24■■□□□ 1.79
DDX4Q9NQI0 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
DDX4Q9NQI0 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC26.24■■□□□ 1.79
DDX4Q9NQI0 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
DDX4Q9NQI0 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC26.24■■□□□ 1.79
DDX4Q9NQI0 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC26.23■■□□□ 1.79
DDX4Q9NQI0 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
DDX4Q9NQI0 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
DDX4Q9NQI0 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
DDX4Q9NQI0 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC26.23■■□□□ 1.79
DDX4Q9NQI0 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
DDX4Q9NQI0 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
DDX4Q9NQI0 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
DDX4Q9NQI0 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
DDX4Q9NQI0 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC26.23■■□□□ 1.79
DDX4Q9NQI0 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
DDX4Q9NQI0 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
DDX4Q9NQI0 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
DDX4Q9NQI0 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
DDX4Q9NQI0 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC26.22■■□□□ 1.79
DDX4Q9NQI0 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
DDX4Q9NQI0 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC26.22■■□□□ 1.79
DDX4Q9NQI0 AC004911.1-201ENST00000416316 871 ntBASIC26.22■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms