Protein–RNA interactions for Protein: Q9NQG5

RPRD1B, Regulation of nuclear pre-mRNA domain-containing protein 1B, humanhuman

Known RBP Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1BQ9NQG5 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RPRD1BQ9NQG5 RNF165-205ENST00000588679 2904 ntBASIC20.03■□□□□ 0.8
RPRD1BQ9NQG5 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.03■□□□□ 0.8
RPRD1BQ9NQG5 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RPRD1BQ9NQG5 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.03■□□□□ 0.8
RPRD1BQ9NQG5 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
RPRD1BQ9NQG5 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RPRD1BQ9NQG5 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RPRD1BQ9NQG5 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RPRD1BQ9NQG5 AC007375.3-201ENST00000600936 2314 ntBASIC20.02■□□□□ 0.8
RPRD1BQ9NQG5 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.02■□□□□ 0.8
RPRD1BQ9NQG5 TK2-216ENST00000564917 1156 ntTSL 3 BASIC20.02■□□□□ 0.8
RPRD1BQ9NQG5 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC20.02■□□□□ 0.8
RPRD1BQ9NQG5 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.02■□□□□ 0.79
RPRD1BQ9NQG5 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RPRD1BQ9NQG5 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RPRD1BQ9NQG5 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RPRD1BQ9NQG5 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.01■□□□□ 0.79
RPRD1BQ9NQG5 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.01■□□□□ 0.79
RPRD1BQ9NQG5 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RPRD1BQ9NQG5 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.01■□□□□ 0.79
RPRD1BQ9NQG5 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.01■□□□□ 0.79
RPRD1BQ9NQG5 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC20.01■□□□□ 0.79
RPRD1BQ9NQG5 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.01■□□□□ 0.79
RPRD1BQ9NQG5 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
RPRD1BQ9NQG5 AL031848.2-201ENST00000607670 837 ntBASIC20.01■□□□□ 0.79
RPRD1BQ9NQG5 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.01■□□□□ 0.79
RPRD1BQ9NQG5 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.01■□□□□ 0.79
RPRD1BQ9NQG5 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RPRD1BQ9NQG5 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
RPRD1BQ9NQG5 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RPRD1BQ9NQG5 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RPRD1BQ9NQG5 AL353803.4-201ENST00000565882 1934 ntBASIC20■□□□□ 0.79
RPRD1BQ9NQG5 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RPRD1BQ9NQG5 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
RPRD1BQ9NQG5 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RPRD1BQ9NQG5 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20■□□□□ 0.79
RPRD1BQ9NQG5 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20■□□□□ 0.79
RPRD1BQ9NQG5 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20■□□□□ 0.79
RPRD1BQ9NQG5 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20■□□□□ 0.79
RPRD1BQ9NQG5 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RPRD1BQ9NQG5 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RPRD1BQ9NQG5 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20■□□□□ 0.79
RPRD1BQ9NQG5 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
RPRD1BQ9NQG5 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.99■□□□□ 0.79
RPRD1BQ9NQG5 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
RPRD1BQ9NQG5 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RPRD1BQ9NQG5 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RPRD1BQ9NQG5 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC19.99■□□□□ 0.79
RPRD1BQ9NQG5 AC137630.3-201ENST00000607245 391 ntBASIC19.99■□□□□ 0.79
RPRD1BQ9NQG5 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC19.99■□□□□ 0.79
RPRD1BQ9NQG5 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.99■□□□□ 0.79
RPRD1BQ9NQG5 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RPRD1BQ9NQG5 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
RPRD1BQ9NQG5 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
RPRD1BQ9NQG5 GUSBP5-202ENST00000510805 1989 ntBASIC19.99■□□□□ 0.79
RPRD1BQ9NQG5 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.99■□□□□ 0.79
RPRD1BQ9NQG5 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
RPRD1BQ9NQG5 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RPRD1BQ9NQG5 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
RPRD1BQ9NQG5 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RPRD1BQ9NQG5 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.98■□□□□ 0.79
RPRD1BQ9NQG5 SENP5-202ENST00000419026 973 ntTSL 3 BASIC19.98■□□□□ 0.79
RPRD1BQ9NQG5 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19.98■□□□□ 0.79
RPRD1BQ9NQG5 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
RPRD1BQ9NQG5 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
RPRD1BQ9NQG5 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
RPRD1BQ9NQG5 LINC00526-201ENST00000581067 1875 ntBASIC19.98■□□□□ 0.79
RPRD1BQ9NQG5 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RPRD1BQ9NQG5 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RPRD1BQ9NQG5 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.98■□□□□ 0.79
RPRD1BQ9NQG5 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.98■□□□□ 0.79
RPRD1BQ9NQG5 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RPRD1BQ9NQG5 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RPRD1BQ9NQG5 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
RPRD1BQ9NQG5 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
RPRD1BQ9NQG5 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
RPRD1BQ9NQG5 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
RPRD1BQ9NQG5 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC19.97■□□□□ 0.79
RPRD1BQ9NQG5 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
RPRD1BQ9NQG5 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RPRD1BQ9NQG5 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RPRD1BQ9NQG5 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RPRD1BQ9NQG5 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RPRD1BQ9NQG5 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
RPRD1BQ9NQG5 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RPRD1BQ9NQG5 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RPRD1BQ9NQG5 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RPRD1BQ9NQG5 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RPRD1BQ9NQG5 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC19.96■□□□□ 0.79
RPRD1BQ9NQG5 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
RPRD1BQ9NQG5 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC19.96■□□□□ 0.79
RPRD1BQ9NQG5 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RPRD1BQ9NQG5 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RPRD1BQ9NQG5 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RPRD1BQ9NQG5 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.95■□□□□ 0.78
RPRD1BQ9NQG5 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
RPRD1BQ9NQG5 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RPRD1BQ9NQG5 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RPRD1BQ9NQG5 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms