Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 TMEM202-AS1-202ENST00000565181 2325 ntBASIC25.54■■□□□ 1.68
ZFYVE28Q9HCC9 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
ZFYVE28Q9HCC9 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC25.53■■□□□ 1.68
ZFYVE28Q9HCC9 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC25.53■■□□□ 1.68
ZFYVE28Q9HCC9 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
ZFYVE28Q9HCC9 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC25.53■■□□□ 1.68
ZFYVE28Q9HCC9 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
ZFYVE28Q9HCC9 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC25.53■■□□□ 1.68
ZFYVE28Q9HCC9 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC25.53■■□□□ 1.68
ZFYVE28Q9HCC9 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC25.53■■□□□ 1.68
ZFYVE28Q9HCC9 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
ZFYVE28Q9HCC9 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
ZFYVE28Q9HCC9 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
ZFYVE28Q9HCC9 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
ZFYVE28Q9HCC9 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC25.52■■□□□ 1.68
ZFYVE28Q9HCC9 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC25.52■■□□□ 1.68
ZFYVE28Q9HCC9 KRT18P6-201ENST00000555540 1265 ntBASIC25.52■■□□□ 1.68
ZFYVE28Q9HCC9 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
ZFYVE28Q9HCC9 PARP1-210ENST00000629232 477 ntTSL 5 BASIC25.52■■□□□ 1.68
ZFYVE28Q9HCC9 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
ZFYVE28Q9HCC9 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
ZFYVE28Q9HCC9 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
ZFYVE28Q9HCC9 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
ZFYVE28Q9HCC9 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC25.51■■□□□ 1.67
ZFYVE28Q9HCC9 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC25.51■■□□□ 1.67
ZFYVE28Q9HCC9 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC25.51■■□□□ 1.67
ZFYVE28Q9HCC9 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC25.51■■□□□ 1.67
ZFYVE28Q9HCC9 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC25.51■■□□□ 1.67
ZFYVE28Q9HCC9 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC25.51■■□□□ 1.67
ZFYVE28Q9HCC9 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
ZFYVE28Q9HCC9 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
ZFYVE28Q9HCC9 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC25.5■■□□□ 1.67
ZFYVE28Q9HCC9 AC083906.2-201ENST00000511578 360 ntBASIC25.5■■□□□ 1.67
ZFYVE28Q9HCC9 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC25.5■■□□□ 1.67
ZFYVE28Q9HCC9 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC25.5■■□□□ 1.67
ZFYVE28Q9HCC9 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
ZFYVE28Q9HCC9 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC25.5■■□□□ 1.67
ZFYVE28Q9HCC9 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
ZFYVE28Q9HCC9 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC25.49■■□□□ 1.67
ZFYVE28Q9HCC9 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
ZFYVE28Q9HCC9 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
ZFYVE28Q9HCC9 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
ZFYVE28Q9HCC9 AC068587.7-201ENST00000641602 218 ntBASIC25.49■■□□□ 1.67
ZFYVE28Q9HCC9 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
ZFYVE28Q9HCC9 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
ZFYVE28Q9HCC9 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
ZFYVE28Q9HCC9 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC25.48■■□□□ 1.67
ZFYVE28Q9HCC9 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
ZFYVE28Q9HCC9 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC25.48■■□□□ 1.67
ZFYVE28Q9HCC9 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC25.48■■□□□ 1.67
ZFYVE28Q9HCC9 TSPY6P-201ENST00000448518 926 ntBASIC25.48■■□□□ 1.67
ZFYVE28Q9HCC9 AC079140.4-201ENST00000507448 529 ntBASIC25.48■■□□□ 1.67
ZFYVE28Q9HCC9 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC25.48■■□□□ 1.67
ZFYVE28Q9HCC9 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC25.48■■□□□ 1.67
ZFYVE28Q9HCC9 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC25.48■■□□□ 1.67
ZFYVE28Q9HCC9 CPT2-209ENST00000636935 803 ntTSL 5 BASIC25.48■■□□□ 1.67
ZFYVE28Q9HCC9 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
ZFYVE28Q9HCC9 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
ZFYVE28Q9HCC9 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
ZFYVE28Q9HCC9 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC25.47■■□□□ 1.67
ZFYVE28Q9HCC9 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
ZFYVE28Q9HCC9 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
ZFYVE28Q9HCC9 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC25.47■■□□□ 1.67
ZFYVE28Q9HCC9 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC25.47■■□□□ 1.67
ZFYVE28Q9HCC9 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC25.47■■□□□ 1.67
ZFYVE28Q9HCC9 MFSD11-216ENST00000590393 1141 ntBASIC25.47■■□□□ 1.67
ZFYVE28Q9HCC9 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC25.47■■□□□ 1.67
ZFYVE28Q9HCC9 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
ZFYVE28Q9HCC9 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC25.46■■□□□ 1.67
ZFYVE28Q9HCC9 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC25.46■■□□□ 1.67
ZFYVE28Q9HCC9 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC25.46■■□□□ 1.67
ZFYVE28Q9HCC9 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC25.46■■□□□ 1.67
ZFYVE28Q9HCC9 SMUG1P1-201ENST00000590640 811 ntBASIC25.46■■□□□ 1.67
ZFYVE28Q9HCC9 AL050303.2-201ENST00000619798 666 ntBASIC25.46■■□□□ 1.67
ZFYVE28Q9HCC9 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC25.46■■□□□ 1.67
ZFYVE28Q9HCC9 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC25.46■■□□□ 1.67
ZFYVE28Q9HCC9 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
ZFYVE28Q9HCC9 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC25.45■■□□□ 1.67
ZFYVE28Q9HCC9 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC25.45■■□□□ 1.67
ZFYVE28Q9HCC9 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
ZFYVE28Q9HCC9 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
ZFYVE28Q9HCC9 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
ZFYVE28Q9HCC9 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
ZFYVE28Q9HCC9 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC25.45■■□□□ 1.66
ZFYVE28Q9HCC9 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC25.45■■□□□ 1.66
ZFYVE28Q9HCC9 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC25.45■■□□□ 1.66
ZFYVE28Q9HCC9 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
ZFYVE28Q9HCC9 AL121749.1-202ENST00000609313 2153 ntBASIC25.45■■□□□ 1.66
ZFYVE28Q9HCC9 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
ZFYVE28Q9HCC9 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC25.45■■□□□ 1.66
ZFYVE28Q9HCC9 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC25.44■■□□□ 1.66
ZFYVE28Q9HCC9 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC25.44■■□□□ 1.66
ZFYVE28Q9HCC9 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
ZFYVE28Q9HCC9 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
ZFYVE28Q9HCC9 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
ZFYVE28Q9HCC9 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC25.44■■□□□ 1.66
ZFYVE28Q9HCC9 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC25.44■■□□□ 1.66
ZFYVE28Q9HCC9 MAZ-216ENST00000616501 991 ntTSL 5 BASIC25.44■■□□□ 1.66
ZFYVE28Q9HCC9 AC231657.2-201ENST00000624556 255 ntBASIC25.44■■□□□ 1.66
ZFYVE28Q9HCC9 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 12.1 ms