Protein–RNA interactions for Protein: Q9HAZ1

CLK4, Dual specificity protein kinase CLK4, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4Q9HAZ1 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CLK4Q9HAZ1 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CLK4Q9HAZ1 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CLK4Q9HAZ1 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CLK4Q9HAZ1 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC21.34■■□□□ 1.01
CLK4Q9HAZ1 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CLK4Q9HAZ1 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CLK4Q9HAZ1 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CLK4Q9HAZ1 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CLK4Q9HAZ1 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CLK4Q9HAZ1 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.34■■□□□ 1.01
CLK4Q9HAZ1 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CLK4Q9HAZ1 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.33■■□□□ 1.01
CLK4Q9HAZ1 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CLK4Q9HAZ1 ECEL1P1-201ENST00000373592 1742 ntBASIC21.33■■□□□ 1.01
CLK4Q9HAZ1 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CLK4Q9HAZ1 QDPR-206ENST00000508623 601 ntTSL 3 BASIC21.33■■□□□ 1.01
CLK4Q9HAZ1 AC131281.2-201ENST00000520478 145 ntBASIC21.33■■□□□ 1.01
CLK4Q9HAZ1 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CLK4Q9HAZ1 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC21.33■■□□□ 1.01
CLK4Q9HAZ1 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
CLK4Q9HAZ1 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.33■■□□□ 1
CLK4Q9HAZ1 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.33■■□□□ 1
CLK4Q9HAZ1 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.33■■□□□ 1
CLK4Q9HAZ1 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.33■■□□□ 1
CLK4Q9HAZ1 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
CLK4Q9HAZ1 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CLK4Q9HAZ1 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CLK4Q9HAZ1 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CLK4Q9HAZ1 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
CLK4Q9HAZ1 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
CLK4Q9HAZ1 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC21.32■■□□□ 1
CLK4Q9HAZ1 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC21.32■■□□□ 1
CLK4Q9HAZ1 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC21.32■■□□□ 1
CLK4Q9HAZ1 GATM-206ENST00000558336 1522 ntTSL 2 BASIC21.32■■□□□ 1
CLK4Q9HAZ1 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.32■■□□□ 1
CLK4Q9HAZ1 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
CLK4Q9HAZ1 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
CLK4Q9HAZ1 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.32■■□□□ 1
CLK4Q9HAZ1 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CLK4Q9HAZ1 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
CLK4Q9HAZ1 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CLK4Q9HAZ1 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.32■■□□□ 1
CLK4Q9HAZ1 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CLK4Q9HAZ1 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CLK4Q9HAZ1 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CLK4Q9HAZ1 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
CLK4Q9HAZ1 C17orf82-201ENST00000623772 1530 ntBASIC21.31■■□□□ 1
CLK4Q9HAZ1 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC21.31■■□□□ 1
CLK4Q9HAZ1 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
CLK4Q9HAZ1 TRIR-202ENST00000588213 841 ntTSL 3 BASIC21.31■■□□□ 1
CLK4Q9HAZ1 AC092171.4-201ENST00000609130 632 ntBASIC21.31■■□□□ 1
CLK4Q9HAZ1 AC241377.3-202ENST00000626088 1088 ntBASIC21.31■■□□□ 1
CLK4Q9HAZ1 AC241585.3-202ENST00000628937 1088 ntBASIC21.31■■□□□ 1
CLK4Q9HAZ1 AC245100.8-202ENST00000629247 1058 ntBASIC21.31■■□□□ 1
CLK4Q9HAZ1 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.31■■□□□ 1
CLK4Q9HAZ1 AC008406.3-201ENST00000620001 1374 ntBASIC21.31■■□□□ 1
CLK4Q9HAZ1 FP325331.1-202ENST00000623531 1380 ntBASIC21.31■■□□□ 1
CLK4Q9HAZ1 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.31■■□□□ 1
CLK4Q9HAZ1 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CLK4Q9HAZ1 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.31■■□□□ 1
CLK4Q9HAZ1 SRD5A1P1-201ENST00000442297 786 ntBASIC21.3■■□□□ 1
CLK4Q9HAZ1 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC21.3■■□□□ 1
CLK4Q9HAZ1 RASSF1-AS1-201ENST00000629828 790 ntBASIC21.3■■□□□ 1
CLK4Q9HAZ1 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC21.3■■□□□ 1
CLK4Q9HAZ1 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
CLK4Q9HAZ1 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.3■■□□□ 1
CLK4Q9HAZ1 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.3■■□□□ 1
CLK4Q9HAZ1 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.29■■□□□ 1
CLK4Q9HAZ1 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
CLK4Q9HAZ1 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CLK4Q9HAZ1 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CLK4Q9HAZ1 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
CLK4Q9HAZ1 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CLK4Q9HAZ1 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CLK4Q9HAZ1 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC21.29■■□□□ 1
CLK4Q9HAZ1 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC21.29■■□□□ 1
CLK4Q9HAZ1 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CLK4Q9HAZ1 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
CLK4Q9HAZ1 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.29■■□□□ 1
CLK4Q9HAZ1 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.28■■□□□ 1
CLK4Q9HAZ1 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
CLK4Q9HAZ1 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CLK4Q9HAZ1 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC21.28■■□□□ 1
CLK4Q9HAZ1 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC21.28■■□□□ 1
CLK4Q9HAZ1 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC21.28■■□□□ 1
CLK4Q9HAZ1 MIR4466-201ENST00000606121 54 ntBASIC21.28■■□□□ 1
CLK4Q9HAZ1 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
CLK4Q9HAZ1 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.28■■□□□ 1
CLK4Q9HAZ1 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CLK4Q9HAZ1 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.27■■□□□ 1
CLK4Q9HAZ1 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
CLK4Q9HAZ1 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.27■■□□□ 1
CLK4Q9HAZ1 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CLK4Q9HAZ1 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.27■■□□□ 1
CLK4Q9HAZ1 PKD1P6-201ENST00000343738 4769 ntBASIC21.27■■□□□ 1
CLK4Q9HAZ1 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CLK4Q9HAZ1 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
CLK4Q9HAZ1 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC21.27■■□□□ 1
CLK4Q9HAZ1 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms