Protein–RNA interactions for Protein: Q9H6L5

RETREG1, Reticulophagy regulator 1, humanhuman

Predictions only

Length 497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1Q9H6L5 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
RETREG1Q9H6L5 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RETREG1Q9H6L5 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC22.56■■□□□ 1.2
RETREG1Q9H6L5 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
RETREG1Q9H6L5 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
RETREG1Q9H6L5 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
RETREG1Q9H6L5 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC22.56■■□□□ 1.2
RETREG1Q9H6L5 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC22.55■■□□□ 1.2
RETREG1Q9H6L5 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
RETREG1Q9H6L5 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC22.55■■□□□ 1.2
RETREG1Q9H6L5 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RETREG1Q9H6L5 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
RETREG1Q9H6L5 AC099791.1-201ENST00000416440 715 ntBASIC22.55■■□□□ 1.2
RETREG1Q9H6L5 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC22.55■■□□□ 1.2
RETREG1Q9H6L5 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC22.55■■□□□ 1.2
RETREG1Q9H6L5 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC22.55■■□□□ 1.2
RETREG1Q9H6L5 AC008764.7-201ENST00000593779 1081 ntBASIC22.55■■□□□ 1.2
RETREG1Q9H6L5 AC087239.1-201ENST00000622671 572 ntBASIC22.55■■□□□ 1.2
RETREG1Q9H6L5 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
RETREG1Q9H6L5 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC22.55■■□□□ 1.2
RETREG1Q9H6L5 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
RETREG1Q9H6L5 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
RETREG1Q9H6L5 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
RETREG1Q9H6L5 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
RETREG1Q9H6L5 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC22.54■■□□□ 1.2
RETREG1Q9H6L5 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
RETREG1Q9H6L5 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RETREG1Q9H6L5 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC22.54■■□□□ 1.2
RETREG1Q9H6L5 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC22.54■■□□□ 1.2
RETREG1Q9H6L5 AC010525.1-201ENST00000585559 441 ntBASIC22.54■■□□□ 1.2
RETREG1Q9H6L5 CA15P2-201ENST00000611168 834 ntBASIC22.54■■□□□ 1.2
RETREG1Q9H6L5 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC22.54■■□□□ 1.2
RETREG1Q9H6L5 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
RETREG1Q9H6L5 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
RETREG1Q9H6L5 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC22.53■■□□□ 1.2
RETREG1Q9H6L5 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
RETREG1Q9H6L5 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
RETREG1Q9H6L5 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RETREG1Q9H6L5 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RETREG1Q9H6L5 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
RETREG1Q9H6L5 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RETREG1Q9H6L5 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
RETREG1Q9H6L5 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RETREG1Q9H6L5 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RETREG1Q9H6L5 ESRRAP2-201ENST00000418437 1549 ntBASIC22.52■■□□□ 1.2
RETREG1Q9H6L5 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC22.52■■□□□ 1.2
RETREG1Q9H6L5 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
RETREG1Q9H6L5 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
RETREG1Q9H6L5 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RETREG1Q9H6L5 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
RETREG1Q9H6L5 AC126544.1-201ENST00000580842 1059 ntBASIC22.52■■□□□ 1.2
RETREG1Q9H6L5 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC22.52■■□□□ 1.2
RETREG1Q9H6L5 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RETREG1Q9H6L5 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC22.52■■□□□ 1.2
RETREG1Q9H6L5 USP45-205ENST00000472914 1617 ntTSL 5 BASIC22.52■■□□□ 1.2
RETREG1Q9H6L5 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC22.52■■□□□ 1.2
RETREG1Q9H6L5 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
RETREG1Q9H6L5 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RETREG1Q9H6L5 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RETREG1Q9H6L5 EBPL-204ENST00000378272 766 ntTSL 3 BASIC22.51■■□□□ 1.19
RETREG1Q9H6L5 IGHV3-19-201ENST00000521488 291 ntBASIC22.51■■□□□ 1.19
RETREG1Q9H6L5 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC22.51■■□□□ 1.19
RETREG1Q9H6L5 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
RETREG1Q9H6L5 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC22.51■■□□□ 1.19
RETREG1Q9H6L5 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RETREG1Q9H6L5 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
RETREG1Q9H6L5 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
RETREG1Q9H6L5 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RETREG1Q9H6L5 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC22.5■■□□□ 1.19
RETREG1Q9H6L5 AC010141.3-201ENST00000456659 717 ntBASIC22.5■■□□□ 1.19
RETREG1Q9H6L5 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC22.5■■□□□ 1.19
RETREG1Q9H6L5 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC22.5■■□□□ 1.19
RETREG1Q9H6L5 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
RETREG1Q9H6L5 MAG-206ENST00000597035 542 ntTSL 4 BASIC22.5■■□□□ 1.19
RETREG1Q9H6L5 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RETREG1Q9H6L5 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
RETREG1Q9H6L5 EI24-211ENST00000534546 1544 ntTSL 2 BASIC22.5■■□□□ 1.19
RETREG1Q9H6L5 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
RETREG1Q9H6L5 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
RETREG1Q9H6L5 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RETREG1Q9H6L5 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
RETREG1Q9H6L5 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC22.49■■□□□ 1.19
RETREG1Q9H6L5 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
RETREG1Q9H6L5 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC22.49■■□□□ 1.19
RETREG1Q9H6L5 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
RETREG1Q9H6L5 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
RETREG1Q9H6L5 LINC01960-201ENST00000563759 1884 ntBASIC22.49■■□□□ 1.19
RETREG1Q9H6L5 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC22.49■■□□□ 1.19
RETREG1Q9H6L5 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RETREG1Q9H6L5 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC22.49■■□□□ 1.19
RETREG1Q9H6L5 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC22.48■■□□□ 1.19
RETREG1Q9H6L5 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC22.48■■□□□ 1.19
RETREG1Q9H6L5 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RETREG1Q9H6L5 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC22.48■■□□□ 1.19
RETREG1Q9H6L5 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC22.48■■□□□ 1.19
RETREG1Q9H6L5 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
RETREG1Q9H6L5 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC22.48■■□□□ 1.19
RETREG1Q9H6L5 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
RETREG1Q9H6L5 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC22.47■■□□□ 1.19
RETREG1Q9H6L5 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms