Protein–RNA interactions for Protein: Q9H6A9

PCNX3, Pecanex-like protein 3, humanhuman

Predictions only

Length 2,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3Q9H6A9 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.1■□□□□ 0.81
PCNX3Q9H6A9 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.1■□□□□ 0.81
PCNX3Q9H6A9 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.1■□□□□ 0.81
PCNX3Q9H6A9 C1orf229-201ENST00000623686 2258 ntBASIC20.1■□□□□ 0.81
PCNX3Q9H6A9 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PCNX3Q9H6A9 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCNX3Q9H6A9 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PCNX3Q9H6A9 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCNX3Q9H6A9 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCNX3Q9H6A9 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCNX3Q9H6A9 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCNX3Q9H6A9 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCNX3Q9H6A9 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
PCNX3Q9H6A9 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCNX3Q9H6A9 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PCNX3Q9H6A9 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.09■□□□□ 0.81
PCNX3Q9H6A9 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.09■□□□□ 0.81
PCNX3Q9H6A9 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCNX3Q9H6A9 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
PCNX3Q9H6A9 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
PCNX3Q9H6A9 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.09■□□□□ 0.81
PCNX3Q9H6A9 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PCNX3Q9H6A9 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
PCNX3Q9H6A9 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCNX3Q9H6A9 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCNX3Q9H6A9 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PCNX3Q9H6A9 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PCNX3Q9H6A9 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.08■□□□□ 0.8
PCNX3Q9H6A9 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.08■□□□□ 0.8
PCNX3Q9H6A9 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCNX3Q9H6A9 AP001330.3-201ENST00000520123 633 ntBASIC20.07■□□□□ 0.8
PCNX3Q9H6A9 AL136162.1-201ENST00000607711 1078 ntBASIC20.07■□□□□ 0.8
PCNX3Q9H6A9 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.07■□□□□ 0.8
PCNX3Q9H6A9 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCNX3Q9H6A9 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCNX3Q9H6A9 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
PCNX3Q9H6A9 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCNX3Q9H6A9 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.07■□□□□ 0.8
PCNX3Q9H6A9 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.07■□□□□ 0.8
PCNX3Q9H6A9 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.07■□□□□ 0.8
PCNX3Q9H6A9 AF213884.3-201ENST00000563833 479 ntBASIC20.07■□□□□ 0.8
PCNX3Q9H6A9 AL139246.5-201ENST00000606645 996 ntBASIC20.07■□□□□ 0.8
PCNX3Q9H6A9 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.07■□□□□ 0.8
PCNX3Q9H6A9 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
PCNX3Q9H6A9 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCNX3Q9H6A9 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCNX3Q9H6A9 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.06■□□□□ 0.8
PCNX3Q9H6A9 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.06■□□□□ 0.8
PCNX3Q9H6A9 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
PCNX3Q9H6A9 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCNX3Q9H6A9 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCNX3Q9H6A9 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PCNX3Q9H6A9 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCNX3Q9H6A9 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCNX3Q9H6A9 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
PCNX3Q9H6A9 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PCNX3Q9H6A9 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.05■□□□□ 0.8
PCNX3Q9H6A9 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.05■□□□□ 0.8
PCNX3Q9H6A9 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.05■□□□□ 0.8
PCNX3Q9H6A9 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.05■□□□□ 0.8
PCNX3Q9H6A9 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.05■□□□□ 0.8
PCNX3Q9H6A9 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
PCNX3Q9H6A9 AC133561.4-201ENST00000566112 224 ntBASIC20.05■□□□□ 0.8
PCNX3Q9H6A9 MIR4767-201ENST00000582827 78 ntBASIC20.05■□□□□ 0.8
PCNX3Q9H6A9 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCNX3Q9H6A9 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCNX3Q9H6A9 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCNX3Q9H6A9 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCNX3Q9H6A9 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
PCNX3Q9H6A9 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.04■□□□□ 0.8
PCNX3Q9H6A9 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCNX3Q9H6A9 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.04■□□□□ 0.8
PCNX3Q9H6A9 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCNX3Q9H6A9 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCNX3Q9H6A9 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.04■□□□□ 0.8
PCNX3Q9H6A9 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCNX3Q9H6A9 EDA-201ENST00000338901 1233 ntBASIC20.03■□□□□ 0.8
PCNX3Q9H6A9 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.03■□□□□ 0.8
PCNX3Q9H6A9 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
PCNX3Q9H6A9 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCNX3Q9H6A9 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PCNX3Q9H6A9 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PCNX3Q9H6A9 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCNX3Q9H6A9 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
PCNX3Q9H6A9 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
PCNX3Q9H6A9 AC136469.2-201ENST00000623944 1028 ntBASIC20.03■□□□□ 0.8
PCNX3Q9H6A9 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCNX3Q9H6A9 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCNX3Q9H6A9 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PCNX3Q9H6A9 AC019069.1-201ENST00000610008 1333 ntBASIC20.02■□□□□ 0.8
PCNX3Q9H6A9 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PCNX3Q9H6A9 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCNX3Q9H6A9 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PCNX3Q9H6A9 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCNX3Q9H6A9 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCNX3Q9H6A9 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.02■□□□□ 0.8
PCNX3Q9H6A9 AC087742.1-201ENST00000575880 1738 ntBASIC20.02■□□□□ 0.8
PCNX3Q9H6A9 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCNX3Q9H6A9 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCNX3Q9H6A9 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms