Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.01■□□□□ 0.95
PIF1Q9H611 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.01■□□□□ 0.95
PIF1Q9H611 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21■□□□□ 0.95
PIF1Q9H611 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
PIF1Q9H611 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC21■□□□□ 0.95
PIF1Q9H611 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21■□□□□ 0.95
PIF1Q9H611 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
PIF1Q9H611 AC004448.1-201ENST00000458332 883 ntBASIC21■□□□□ 0.95
PIF1Q9H611 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21■□□□□ 0.95
PIF1Q9H611 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
PIF1Q9H611 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PIF1Q9H611 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PIF1Q9H611 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
PIF1Q9H611 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
PIF1Q9H611 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
PIF1Q9H611 THA1P-201ENST00000590384 1145 ntBASIC20.99■□□□□ 0.95
PIF1Q9H611 PVT1_1.1-201ENST00000615125 194 ntBASIC20.99■□□□□ 0.95
PIF1Q9H611 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.99■□□□□ 0.95
PIF1Q9H611 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.99■□□□□ 0.95
PIF1Q9H611 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PIF1Q9H611 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
PIF1Q9H611 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
PIF1Q9H611 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PIF1Q9H611 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
PIF1Q9H611 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PIF1Q9H611 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
PIF1Q9H611 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
PIF1Q9H611 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC20.98■□□□□ 0.95
PIF1Q9H611 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PIF1Q9H611 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
PIF1Q9H611 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PIF1Q9H611 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.98■□□□□ 0.95
PIF1Q9H611 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PIF1Q9H611 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PIF1Q9H611 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.98■□□□□ 0.95
PIF1Q9H611 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
PIF1Q9H611 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
PIF1Q9H611 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PIF1Q9H611 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.97■□□□□ 0.95
PIF1Q9H611 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
PIF1Q9H611 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PIF1Q9H611 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.97■□□□□ 0.95
PIF1Q9H611 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.97■□□□□ 0.95
PIF1Q9H611 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PIF1Q9H611 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
PIF1Q9H611 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PIF1Q9H611 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PIF1Q9H611 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
PIF1Q9H611 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.97■□□□□ 0.95
PIF1Q9H611 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.97■□□□□ 0.95
PIF1Q9H611 MIR4508-201ENST00000584178 70 ntBASIC20.97■□□□□ 0.95
PIF1Q9H611 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
PIF1Q9H611 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PIF1Q9H611 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.97■□□□□ 0.95
PIF1Q9H611 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
PIF1Q9H611 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PIF1Q9H611 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PIF1Q9H611 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.96■□□□□ 0.95
PIF1Q9H611 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.96■□□□□ 0.95
PIF1Q9H611 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
PIF1Q9H611 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
PIF1Q9H611 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC20.96■□□□□ 0.95
PIF1Q9H611 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC20.96■□□□□ 0.95
PIF1Q9H611 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC20.96■□□□□ 0.95
PIF1Q9H611 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
PIF1Q9H611 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PIF1Q9H611 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PIF1Q9H611 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
PIF1Q9H611 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.96■□□□□ 0.95
PIF1Q9H611 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
PIF1Q9H611 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.95■□□□□ 0.95
PIF1Q9H611 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.95■□□□□ 0.94
PIF1Q9H611 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PIF1Q9H611 KRT18P24-201ENST00000344739 1156 ntBASIC20.95■□□□□ 0.94
PIF1Q9H611 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PIF1Q9H611 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
PIF1Q9H611 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PIF1Q9H611 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.95■□□□□ 0.94
PIF1Q9H611 AC087742.1-201ENST00000575880 1738 ntBASIC20.95■□□□□ 0.94
PIF1Q9H611 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
PIF1Q9H611 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PIF1Q9H611 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
PIF1Q9H611 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PIF1Q9H611 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
PIF1Q9H611 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
PIF1Q9H611 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PIF1Q9H611 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PIF1Q9H611 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.94■□□□□ 0.94
PIF1Q9H611 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PIF1Q9H611 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.94■□□□□ 0.94
PIF1Q9H611 AC010980.1-201ENST00000587192 1142 ntBASIC20.94■□□□□ 0.94
PIF1Q9H611 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
PIF1Q9H611 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PIF1Q9H611 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PIF1Q9H611 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PIF1Q9H611 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.93■□□□□ 0.94
PIF1Q9H611 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PIF1Q9H611 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PIF1Q9H611 BEX3-202ENST00000372634 753 ntTSL 2 BASIC20.93■□□□□ 0.94
PIF1Q9H611 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms