Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
POLR2J3Q9H1A7 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
POLR2J3Q9H1A7 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.35■□□□□ 0.85
POLR2J3Q9H1A7 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
POLR2J3Q9H1A7 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
POLR2J3Q9H1A7 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
POLR2J3Q9H1A7 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
POLR2J3Q9H1A7 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.34■□□□□ 0.85
POLR2J3Q9H1A7 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
POLR2J3Q9H1A7 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
POLR2J3Q9H1A7 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
POLR2J3Q9H1A7 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
POLR2J3Q9H1A7 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.34■□□□□ 0.85
POLR2J3Q9H1A7 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.34■□□□□ 0.85
POLR2J3Q9H1A7 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.34■□□□□ 0.85
POLR2J3Q9H1A7 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
POLR2J3Q9H1A7 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.33■□□□□ 0.85
POLR2J3Q9H1A7 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.33■□□□□ 0.85
POLR2J3Q9H1A7 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
POLR2J3Q9H1A7 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.33■□□□□ 0.85
POLR2J3Q9H1A7 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.33■□□□□ 0.85
POLR2J3Q9H1A7 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
POLR2J3Q9H1A7 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
POLR2J3Q9H1A7 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.33■□□□□ 0.85
POLR2J3Q9H1A7 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
POLR2J3Q9H1A7 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
POLR2J3Q9H1A7 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.33■□□□□ 0.84
POLR2J3Q9H1A7 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
POLR2J3Q9H1A7 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
POLR2J3Q9H1A7 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.33■□□□□ 0.84
POLR2J3Q9H1A7 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
POLR2J3Q9H1A7 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
POLR2J3Q9H1A7 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
POLR2J3Q9H1A7 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
POLR2J3Q9H1A7 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
POLR2J3Q9H1A7 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
POLR2J3Q9H1A7 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
POLR2J3Q9H1A7 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.32■□□□□ 0.84
POLR2J3Q9H1A7 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
POLR2J3Q9H1A7 PRTG-204ENST00000561292 833 ntTSL 3 BASIC20.32■□□□□ 0.84
POLR2J3Q9H1A7 Z92544.1-202ENST00000571933 1220 ntBASIC20.32■□□□□ 0.84
POLR2J3Q9H1A7 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.32■□□□□ 0.84
POLR2J3Q9H1A7 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
POLR2J3Q9H1A7 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
POLR2J3Q9H1A7 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
POLR2J3Q9H1A7 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.32■□□□□ 0.84
POLR2J3Q9H1A7 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.32■□□□□ 0.84
POLR2J3Q9H1A7 AC092053.2-201ENST00000640557 1818 ntBASIC20.32■□□□□ 0.84
POLR2J3Q9H1A7 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
POLR2J3Q9H1A7 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.31■□□□□ 0.84
POLR2J3Q9H1A7 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
POLR2J3Q9H1A7 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
POLR2J3Q9H1A7 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
POLR2J3Q9H1A7 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.31■□□□□ 0.84
POLR2J3Q9H1A7 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
POLR2J3Q9H1A7 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
POLR2J3Q9H1A7 DUX4L4-201ENST00000566884 1269 ntBASIC20.31■□□□□ 0.84
POLR2J3Q9H1A7 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC20.31■□□□□ 0.84
POLR2J3Q9H1A7 AC009086.3-201ENST00000623486 1008 ntBASIC20.31■□□□□ 0.84
POLR2J3Q9H1A7 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
POLR2J3Q9H1A7 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
POLR2J3Q9H1A7 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
POLR2J3Q9H1A7 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.31■□□□□ 0.84
POLR2J3Q9H1A7 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
POLR2J3Q9H1A7 AC007375.3-201ENST00000600936 2314 ntBASIC20.31■□□□□ 0.84
POLR2J3Q9H1A7 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
POLR2J3Q9H1A7 AC139530.1-201ENST00000575312 1977 ntBASIC20.3■□□□□ 0.84
POLR2J3Q9H1A7 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
POLR2J3Q9H1A7 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.3■□□□□ 0.84
POLR2J3Q9H1A7 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
POLR2J3Q9H1A7 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.3■□□□□ 0.84
POLR2J3Q9H1A7 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
POLR2J3Q9H1A7 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
POLR2J3Q9H1A7 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
POLR2J3Q9H1A7 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.3■□□□□ 0.84
POLR2J3Q9H1A7 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
POLR2J3Q9H1A7 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
POLR2J3Q9H1A7 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.29■□□□□ 0.84
POLR2J3Q9H1A7 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
POLR2J3Q9H1A7 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
POLR2J3Q9H1A7 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
POLR2J3Q9H1A7 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
POLR2J3Q9H1A7 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.29■□□□□ 0.84
POLR2J3Q9H1A7 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.29■□□□□ 0.84
POLR2J3Q9H1A7 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
POLR2J3Q9H1A7 AC092028.1-203ENST00000608262 953 ntBASIC20.29■□□□□ 0.84
POLR2J3Q9H1A7 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC20.29■□□□□ 0.84
POLR2J3Q9H1A7 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
POLR2J3Q9H1A7 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
POLR2J3Q9H1A7 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.28■□□□□ 0.84
POLR2J3Q9H1A7 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.28■□□□□ 0.84
POLR2J3Q9H1A7 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
POLR2J3Q9H1A7 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
POLR2J3Q9H1A7 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.28■□□□□ 0.84
POLR2J3Q9H1A7 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
POLR2J3Q9H1A7 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.28■□□□□ 0.84
POLR2J3Q9H1A7 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
POLR2J3Q9H1A7 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
POLR2J3Q9H1A7 C11orf96-202ENST00000528572 1834 ntBASIC20.28■□□□□ 0.84
POLR2J3Q9H1A7 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms