Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC22.96■■□□□ 1.27
RNF38Q9H0F5 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC22.96■■□□□ 1.27
RNF38Q9H0F5 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC22.96■■□□□ 1.27
RNF38Q9H0F5 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC22.96■■□□□ 1.27
RNF38Q9H0F5 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
RNF38Q9H0F5 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC22.95■■□□□ 1.27
RNF38Q9H0F5 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
RNF38Q9H0F5 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
RNF38Q9H0F5 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC22.95■■□□□ 1.26
RNF38Q9H0F5 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
RNF38Q9H0F5 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC22.95■■□□□ 1.26
RNF38Q9H0F5 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC22.95■■□□□ 1.26
RNF38Q9H0F5 AC027612.3-201ENST00000413684 1047 ntBASIC22.95■■□□□ 1.26
RNF38Q9H0F5 YBX1P1-201ENST00000445822 960 ntBASIC22.95■■□□□ 1.26
RNF38Q9H0F5 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC22.95■■□□□ 1.26
RNF38Q9H0F5 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC22.95■■□□□ 1.26
RNF38Q9H0F5 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
RNF38Q9H0F5 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC22.95■■□□□ 1.26
RNF38Q9H0F5 AC104564.3-201ENST00000582367 638 ntBASIC22.95■■□□□ 1.26
RNF38Q9H0F5 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC22.95■■□□□ 1.26
RNF38Q9H0F5 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC22.94■■□□□ 1.26
RNF38Q9H0F5 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC22.94■■□□□ 1.26
RNF38Q9H0F5 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
RNF38Q9H0F5 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
RNF38Q9H0F5 LHPP-203ENST00000392757 840 ntTSL 3 BASIC22.94■■□□□ 1.26
RNF38Q9H0F5 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC22.94■■□□□ 1.26
RNF38Q9H0F5 AL354811.1-201ENST00000610286 706 ntBASIC22.94■■□□□ 1.26
RNF38Q9H0F5 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC22.94■■□□□ 1.26
RNF38Q9H0F5 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
RNF38Q9H0F5 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
RNF38Q9H0F5 HACD1-201ENST00000326961 773 ntTSL 2 BASIC22.93■■□□□ 1.26
RNF38Q9H0F5 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
RNF38Q9H0F5 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC22.93■■□□□ 1.26
RNF38Q9H0F5 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC22.93■■□□□ 1.26
RNF38Q9H0F5 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC22.93■■□□□ 1.26
RNF38Q9H0F5 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC22.93■■□□□ 1.26
RNF38Q9H0F5 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
RNF38Q9H0F5 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC22.92■■□□□ 1.26
RNF38Q9H0F5 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC22.92■■□□□ 1.26
RNF38Q9H0F5 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC22.92■■□□□ 1.26
RNF38Q9H0F5 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
RNF38Q9H0F5 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC22.92■■□□□ 1.26
RNF38Q9H0F5 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC22.92■■□□□ 1.26
RNF38Q9H0F5 RAB43-208ENST00000615093 783 ntTSL 5 BASIC22.92■■□□□ 1.26
RNF38Q9H0F5 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC22.92■■□□□ 1.26
RNF38Q9H0F5 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
RNF38Q9H0F5 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
RNF38Q9H0F5 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
RNF38Q9H0F5 RARA-203ENST00000394086 2008 ntTSL 2 BASIC22.91■■□□□ 1.26
RNF38Q9H0F5 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC22.91■■□□□ 1.26
RNF38Q9H0F5 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC22.91■■□□□ 1.26
RNF38Q9H0F5 PARL-206ENST00000435888 1098 ntTSL 5 BASIC22.91■■□□□ 1.26
RNF38Q9H0F5 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC22.91■■□□□ 1.26
RNF38Q9H0F5 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC22.91■■□□□ 1.26
RNF38Q9H0F5 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
RNF38Q9H0F5 EI24-211ENST00000534546 1544 ntTSL 2 BASIC22.91■■□□□ 1.26
RNF38Q9H0F5 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC22.91■■□□□ 1.26
RNF38Q9H0F5 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
RNF38Q9H0F5 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
RNF38Q9H0F5 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
RNF38Q9H0F5 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC22.9■■□□□ 1.26
RNF38Q9H0F5 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC22.9■■□□□ 1.26
RNF38Q9H0F5 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
RNF38Q9H0F5 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC22.9■■□□□ 1.26
RNF38Q9H0F5 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
RNF38Q9H0F5 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
RNF38Q9H0F5 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC22.9■■□□□ 1.26
RNF38Q9H0F5 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC22.9■■□□□ 1.26
RNF38Q9H0F5 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC22.9■■□□□ 1.26
RNF38Q9H0F5 AC123595.1-201ENST00000440769 1046 ntBASIC22.9■■□□□ 1.26
RNF38Q9H0F5 AC034268.1-201ENST00000441047 882 ntBASIC22.9■■□□□ 1.26
RNF38Q9H0F5 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC22.9■■□□□ 1.26
RNF38Q9H0F5 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC22.9■■□□□ 1.26
RNF38Q9H0F5 AC092068.2-201ENST00000590491 1708 ntBASIC22.9■■□□□ 1.26
RNF38Q9H0F5 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
RNF38Q9H0F5 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
RNF38Q9H0F5 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
RNF38Q9H0F5 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.26
RNF38Q9H0F5 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
RNF38Q9H0F5 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
RNF38Q9H0F5 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
RNF38Q9H0F5 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
RNF38Q9H0F5 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC22.89■■□□□ 1.26
RNF38Q9H0F5 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.26
RNF38Q9H0F5 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.25
RNF38Q9H0F5 DUX4L2-201ENST00000561772 1275 ntBASIC22.89■■□□□ 1.25
RNF38Q9H0F5 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC22.89■■□□□ 1.25
RNF38Q9H0F5 DUX4L6-201ENST00000626483 1275 ntBASIC22.89■■□□□ 1.25
RNF38Q9H0F5 DUX4L1-201ENST00000627662 1275 ntBASIC22.89■■□□□ 1.25
RNF38Q9H0F5 DUX4L8-201ENST00000629013 1275 ntBASIC22.89■■□□□ 1.25
RNF38Q9H0F5 DUX4L3-201ENST00000630187 1275 ntBASIC22.89■■□□□ 1.25
RNF38Q9H0F5 DUX4L7-201ENST00000630678 1275 ntBASIC22.89■■□□□ 1.25
RNF38Q9H0F5 DUX4L5-201ENST00000630834 1275 ntBASIC22.89■■□□□ 1.25
RNF38Q9H0F5 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC22.89■■□□□ 1.25
RNF38Q9H0F5 AC105233.4-201ENST00000642045 216 ntBASIC22.89■■□□□ 1.25
RNF38Q9H0F5 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC22.89■■□□□ 1.25
RNF38Q9H0F5 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
RNF38Q9H0F5 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
RNF38Q9H0F5 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
RNF38Q9H0F5 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC22.88■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms