Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
KRTAP4-3Q9BYR4 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC7.53□□□□□ -1.2
KRTAP4-3Q9BYR4 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
KRTAP4-3Q9BYR4 ANOS2P-203ENST00000472227 1816 ntBASIC7.53□□□□□ -1.2
KRTAP4-3Q9BYR4 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
KRTAP4-3Q9BYR4 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
KRTAP4-3Q9BYR4 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
KRTAP4-3Q9BYR4 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC7.53□□□□□ -1.2
KRTAP4-3Q9BYR4 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
KRTAP4-3Q9BYR4 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
KRTAP4-3Q9BYR4 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
KRTAP4-3Q9BYR4 DUX4L2-201ENST00000561772 1275 ntBASIC7.53□□□□□ -1.2
KRTAP4-3Q9BYR4 MIR5787-201ENST00000611784 55 ntBASIC7.53□□□□□ -1.2
KRTAP4-3Q9BYR4 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC7.53□□□□□ -1.2
KRTAP4-3Q9BYR4 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
KRTAP4-3Q9BYR4 DUX4L6-201ENST00000626483 1275 ntBASIC7.53□□□□□ -1.2
KRTAP4-3Q9BYR4 DUX4L1-201ENST00000627662 1275 ntBASIC7.53□□□□□ -1.2
KRTAP4-3Q9BYR4 DUX4L8-201ENST00000629013 1275 ntBASIC7.53□□□□□ -1.2
KRTAP4-3Q9BYR4 DUX4L3-201ENST00000630187 1275 ntBASIC7.53□□□□□ -1.2
KRTAP4-3Q9BYR4 DUX4L7-201ENST00000630678 1275 ntBASIC7.53□□□□□ -1.2
KRTAP4-3Q9BYR4 DUX4L5-201ENST00000630834 1275 ntBASIC7.53□□□□□ -1.2
KRTAP4-3Q9BYR4 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
KRTAP4-3Q9BYR4 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
KRTAP4-3Q9BYR4 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
KRTAP4-3Q9BYR4 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC7.53□□□□□ -1.2
KRTAP4-3Q9BYR4 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
KRTAP4-3Q9BYR4 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
KRTAP4-3Q9BYR4 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC7.53□□□□□ -1.2
KRTAP4-3Q9BYR4 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
KRTAP4-3Q9BYR4 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
KRTAP4-3Q9BYR4 THRA-202ENST00000394121 2260 ntTSL 2 BASIC7.53□□□□□ -1.2
KRTAP4-3Q9BYR4 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
KRTAP4-3Q9BYR4 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC7.52□□□□□ -1.2
KRTAP4-3Q9BYR4 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC7.52□□□□□ -1.2
KRTAP4-3Q9BYR4 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
KRTAP4-3Q9BYR4 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
KRTAP4-3Q9BYR4 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
KRTAP4-3Q9BYR4 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC7.52□□□□□ -1.21
KRTAP4-3Q9BYR4 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
KRTAP4-3Q9BYR4 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC7.52□□□□□ -1.21
KRTAP4-3Q9BYR4 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC7.52□□□□□ -1.21
KRTAP4-3Q9BYR4 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
KRTAP4-3Q9BYR4 STX4-202ENST00000394998 1498 ntTSL 2 BASIC7.52□□□□□ -1.21
KRTAP4-3Q9BYR4 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
KRTAP4-3Q9BYR4 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC7.52□□□□□ -1.21
KRTAP4-3Q9BYR4 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
KRTAP4-3Q9BYR4 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
KRTAP4-3Q9BYR4 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
KRTAP4-3Q9BYR4 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
KRTAP4-3Q9BYR4 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC7.52□□□□□ -1.21
KRTAP4-3Q9BYR4 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC7.52□□□□□ -1.21
KRTAP4-3Q9BYR4 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
KRTAP4-3Q9BYR4 IGHV3-19-201ENST00000521488 291 ntBASIC7.52□□□□□ -1.21
KRTAP4-3Q9BYR4 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
KRTAP4-3Q9BYR4 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
KRTAP4-3Q9BYR4 KRT18P61-201ENST00000585825 1298 ntBASIC7.52□□□□□ -1.21
KRTAP4-3Q9BYR4 MPST-208ENST00000628507 698 ntTSL 5 BASIC7.52□□□□□ -1.21
KRTAP4-3Q9BYR4 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
KRTAP4-3Q9BYR4 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC7.52□□□□□ -1.21
KRTAP4-3Q9BYR4 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
KRTAP4-3Q9BYR4 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
KRTAP4-3Q9BYR4 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
KRTAP4-3Q9BYR4 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
KRTAP4-3Q9BYR4 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
KRTAP4-3Q9BYR4 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC7.52□□□□□ -1.21
KRTAP4-3Q9BYR4 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC7.52□□□□□ -1.21
KRTAP4-3Q9BYR4 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC7.51□□□□□ -1.21
KRTAP4-3Q9BYR4 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
KRTAP4-3Q9BYR4 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
KRTAP4-3Q9BYR4 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
KRTAP4-3Q9BYR4 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC7.51□□□□□ -1.21
KRTAP4-3Q9BYR4 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC7.51□□□□□ -1.21
KRTAP4-3Q9BYR4 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
KRTAP4-3Q9BYR4 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC7.51□□□□□ -1.21
KRTAP4-3Q9BYR4 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
KRTAP4-3Q9BYR4 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
KRTAP4-3Q9BYR4 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
KRTAP4-3Q9BYR4 NME4-202ENST00000382940 766 ntTSL 3 BASIC7.51□□□□□ -1.21
KRTAP4-3Q9BYR4 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
KRTAP4-3Q9BYR4 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
KRTAP4-3Q9BYR4 KRT18P5-201ENST00000436075 1291 ntBASIC7.51□□□□□ -1.21
KRTAP4-3Q9BYR4 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC7.51□□□□□ -1.21
KRTAP4-3Q9BYR4 AC104564.3-201ENST00000582367 638 ntBASIC7.51□□□□□ -1.21
KRTAP4-3Q9BYR4 NME4-211ENST00000620944 1193 ntTSL 2 BASIC7.51□□□□□ -1.21
KRTAP4-3Q9BYR4 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC7.51□□□□□ -1.21
KRTAP4-3Q9BYR4 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
KRTAP4-3Q9BYR4 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC7.51□□□□□ -1.21
KRTAP4-3Q9BYR4 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
KRTAP4-3Q9BYR4 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC7.5□□□□□ -1.21
KRTAP4-3Q9BYR4 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
KRTAP4-3Q9BYR4 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
KRTAP4-3Q9BYR4 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
KRTAP4-3Q9BYR4 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
KRTAP4-3Q9BYR4 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
KRTAP4-3Q9BYR4 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
KRTAP4-3Q9BYR4 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
KRTAP4-3Q9BYR4 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
KRTAP4-3Q9BYR4 FP325331.1-202ENST00000623531 1380 ntBASIC7.5□□□□□ -1.21
KRTAP4-3Q9BYR4 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
KRTAP4-3Q9BYR4 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms