Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20.4■□□□□ 0.86
RSPO3Q9BXY4 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.4■□□□□ 0.86
RSPO3Q9BXY4 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.4■□□□□ 0.86
RSPO3Q9BXY4 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.4■□□□□ 0.86
RSPO3Q9BXY4 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.39■□□□□ 0.86
RSPO3Q9BXY4 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.39■□□□□ 0.86
RSPO3Q9BXY4 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
RSPO3Q9BXY4 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
RSPO3Q9BXY4 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
RSPO3Q9BXY4 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.39■□□□□ 0.85
RSPO3Q9BXY4 C17orf82-201ENST00000623772 1530 ntBASIC20.39■□□□□ 0.85
RSPO3Q9BXY4 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RSPO3Q9BXY4 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
RSPO3Q9BXY4 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
RSPO3Q9BXY4 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
RSPO3Q9BXY4 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
RSPO3Q9BXY4 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RSPO3Q9BXY4 AC137767.1-201ENST00000602918 1920 ntBASIC20.39■□□□□ 0.85
RSPO3Q9BXY4 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
RSPO3Q9BXY4 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RSPO3Q9BXY4 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
RSPO3Q9BXY4 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
RSPO3Q9BXY4 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RSPO3Q9BXY4 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RSPO3Q9BXY4 UNC93B8-201ENST00000511903 705 ntBASIC20.38■□□□□ 0.85
RSPO3Q9BXY4 KRT125P-201ENST00000546827 989 ntBASIC20.38■□□□□ 0.85
RSPO3Q9BXY4 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.38■□□□□ 0.85
RSPO3Q9BXY4 AC092053.2-201ENST00000640557 1818 ntBASIC20.38■□□□□ 0.85
RSPO3Q9BXY4 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.38■□□□□ 0.85
RSPO3Q9BXY4 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.38■□□□□ 0.85
RSPO3Q9BXY4 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.37■□□□□ 0.85
RSPO3Q9BXY4 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RSPO3Q9BXY4 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.37■□□□□ 0.85
RSPO3Q9BXY4 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
RSPO3Q9BXY4 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RSPO3Q9BXY4 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RSPO3Q9BXY4 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RSPO3Q9BXY4 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.37■□□□□ 0.85
RSPO3Q9BXY4 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RSPO3Q9BXY4 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.37■□□□□ 0.85
RSPO3Q9BXY4 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RSPO3Q9BXY4 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RSPO3Q9BXY4 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RSPO3Q9BXY4 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.36■□□□□ 0.85
RSPO3Q9BXY4 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RSPO3Q9BXY4 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RSPO3Q9BXY4 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RSPO3Q9BXY4 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.36■□□□□ 0.85
RSPO3Q9BXY4 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.36■□□□□ 0.85
RSPO3Q9BXY4 AC010997.5-201ENST00000609182 354 ntBASIC20.36■□□□□ 0.85
RSPO3Q9BXY4 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RSPO3Q9BXY4 C11orf96-202ENST00000528572 1834 ntBASIC20.36■□□□□ 0.85
RSPO3Q9BXY4 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
RSPO3Q9BXY4 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RSPO3Q9BXY4 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RSPO3Q9BXY4 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RSPO3Q9BXY4 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RSPO3Q9BXY4 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.35■□□□□ 0.85
RSPO3Q9BXY4 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
RSPO3Q9BXY4 TSPY9P-201ENST00000440215 945 ntBASIC20.35■□□□□ 0.85
RSPO3Q9BXY4 TSPY11P-201ENST00000442607 1045 ntBASIC20.35■□□□□ 0.85
RSPO3Q9BXY4 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.35■□□□□ 0.85
RSPO3Q9BXY4 MTDHP2-201ENST00000601468 714 ntBASIC20.35■□□□□ 0.85
RSPO3Q9BXY4 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
RSPO3Q9BXY4 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RSPO3Q9BXY4 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.35■□□□□ 0.85
RSPO3Q9BXY4 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.35■□□□□ 0.85
RSPO3Q9BXY4 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.34■□□□□ 0.85
RSPO3Q9BXY4 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RSPO3Q9BXY4 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.34■□□□□ 0.85
RSPO3Q9BXY4 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
RSPO3Q9BXY4 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RSPO3Q9BXY4 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
RSPO3Q9BXY4 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RSPO3Q9BXY4 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.34■□□□□ 0.85
RSPO3Q9BXY4 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.34■□□□□ 0.85
RSPO3Q9BXY4 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
RSPO3Q9BXY4 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RSPO3Q9BXY4 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.33■□□□□ 0.85
RSPO3Q9BXY4 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.33■□□□□ 0.85
RSPO3Q9BXY4 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RSPO3Q9BXY4 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.33■□□□□ 0.85
RSPO3Q9BXY4 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RSPO3Q9BXY4 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.33■□□□□ 0.85
RSPO3Q9BXY4 AC004687.1-201ENST00000579003 1625 ntBASIC20.33■□□□□ 0.84
RSPO3Q9BXY4 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
RSPO3Q9BXY4 LINC01960-201ENST00000563759 1884 ntBASIC20.33■□□□□ 0.84
RSPO3Q9BXY4 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
RSPO3Q9BXY4 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RSPO3Q9BXY4 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
RSPO3Q9BXY4 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.32■□□□□ 0.84
RSPO3Q9BXY4 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RSPO3Q9BXY4 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RSPO3Q9BXY4 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.32■□□□□ 0.84
RSPO3Q9BXY4 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.32■□□□□ 0.84
RSPO3Q9BXY4 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.32■□□□□ 0.84
RSPO3Q9BXY4 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RSPO3Q9BXY4 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.31■□□□□ 0.84
RSPO3Q9BXY4 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
RSPO3Q9BXY4 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms