Protein–RNA interactions for Protein: Q9BRF8

CPPED1, Serine/threonine-protein phosphatase CPPED1, humanhuman

Predicted RBP Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPPED1Q9BRF8 MIR6722-201ENST00000617286 78 ntBASIC20.77■□□□□ 0.92
CPPED1Q9BRF8 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.77■□□□□ 0.92
CPPED1Q9BRF8 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CPPED1Q9BRF8 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.77■□□□□ 0.92
CPPED1Q9BRF8 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CPPED1Q9BRF8 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CPPED1Q9BRF8 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CPPED1Q9BRF8 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CPPED1Q9BRF8 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
CPPED1Q9BRF8 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CPPED1Q9BRF8 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CPPED1Q9BRF8 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
CPPED1Q9BRF8 YBX1P4-201ENST00000392794 808 ntBASIC20.76■□□□□ 0.91
CPPED1Q9BRF8 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CPPED1Q9BRF8 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.76■□□□□ 0.91
CPPED1Q9BRF8 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.76■□□□□ 0.91
CPPED1Q9BRF8 AL033527.3-201ENST00000566366 1196 ntBASIC20.76■□□□□ 0.91
CPPED1Q9BRF8 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.76■□□□□ 0.91
CPPED1Q9BRF8 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC20.76■□□□□ 0.91
CPPED1Q9BRF8 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CPPED1Q9BRF8 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CPPED1Q9BRF8 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
CPPED1Q9BRF8 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CPPED1Q9BRF8 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CPPED1Q9BRF8 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.75■□□□□ 0.91
CPPED1Q9BRF8 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC20.75■□□□□ 0.91
CPPED1Q9BRF8 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
CPPED1Q9BRF8 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.75■□□□□ 0.91
CPPED1Q9BRF8 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
CPPED1Q9BRF8 LINC01960-201ENST00000563759 1884 ntBASIC20.75■□□□□ 0.91
CPPED1Q9BRF8 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.75■□□□□ 0.91
CPPED1Q9BRF8 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CPPED1Q9BRF8 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CPPED1Q9BRF8 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CPPED1Q9BRF8 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CPPED1Q9BRF8 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
CPPED1Q9BRF8 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.74■□□□□ 0.91
CPPED1Q9BRF8 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CPPED1Q9BRF8 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.74■□□□□ 0.91
CPPED1Q9BRF8 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CPPED1Q9BRF8 AL137060.1-201ENST00000618151 2648 ntBASIC20.74■□□□□ 0.91
CPPED1Q9BRF8 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CPPED1Q9BRF8 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CPPED1Q9BRF8 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
CPPED1Q9BRF8 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CPPED1Q9BRF8 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CPPED1Q9BRF8 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CPPED1Q9BRF8 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC20.73■□□□□ 0.91
CPPED1Q9BRF8 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.73■□□□□ 0.91
CPPED1Q9BRF8 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
CPPED1Q9BRF8 AC009086.3-201ENST00000623486 1008 ntBASIC20.73■□□□□ 0.91
CPPED1Q9BRF8 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
CPPED1Q9BRF8 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
CPPED1Q9BRF8 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CPPED1Q9BRF8 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.73■□□□□ 0.91
CPPED1Q9BRF8 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CPPED1Q9BRF8 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CPPED1Q9BRF8 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CPPED1Q9BRF8 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
CPPED1Q9BRF8 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.72■□□□□ 0.91
CPPED1Q9BRF8 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
CPPED1Q9BRF8 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CPPED1Q9BRF8 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.72■□□□□ 0.91
CPPED1Q9BRF8 DUX4L4-201ENST00000566884 1269 ntBASIC20.72■□□□□ 0.91
CPPED1Q9BRF8 AL031848.2-201ENST00000607670 837 ntBASIC20.72■□□□□ 0.91
CPPED1Q9BRF8 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CPPED1Q9BRF8 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CPPED1Q9BRF8 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CPPED1Q9BRF8 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
CPPED1Q9BRF8 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CPPED1Q9BRF8 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CPPED1Q9BRF8 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CPPED1Q9BRF8 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CPPED1Q9BRF8 AC021242.3-201ENST00000607598 1377 ntBASIC20.72■□□□□ 0.91
CPPED1Q9BRF8 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.71■□□□□ 0.91
CPPED1Q9BRF8 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CPPED1Q9BRF8 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CPPED1Q9BRF8 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.71■□□□□ 0.91
CPPED1Q9BRF8 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
CPPED1Q9BRF8 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
CPPED1Q9BRF8 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.71■□□□□ 0.91
CPPED1Q9BRF8 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CPPED1Q9BRF8 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.71■□□□□ 0.91
CPPED1Q9BRF8 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CPPED1Q9BRF8 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CPPED1Q9BRF8 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
CPPED1Q9BRF8 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.71■□□□□ 0.91
CPPED1Q9BRF8 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.71■□□□□ 0.91
CPPED1Q9BRF8 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CPPED1Q9BRF8 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CPPED1Q9BRF8 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
CPPED1Q9BRF8 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CPPED1Q9BRF8 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CPPED1Q9BRF8 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.7■□□□□ 0.9
CPPED1Q9BRF8 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.7■□□□□ 0.9
CPPED1Q9BRF8 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.7■□□□□ 0.9
CPPED1Q9BRF8 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.7■□□□□ 0.9
CPPED1Q9BRF8 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CPPED1Q9BRF8 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CPPED1Q9BRF8 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms