Protein–RNA interactions for Protein: Q99959

PKP2, Plakophilin-2, humanhuman

Predictions only

Length 881 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP2Q99959 RPS2P7-201ENST00000447334 885 ntBASIC20.75■□□□□ 0.91
PKP2Q99959 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.75■□□□□ 0.91
PKP2Q99959 AC022413.1-201ENST00000624602 984 ntBASIC20.75■□□□□ 0.91
PKP2Q99959 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PKP2Q99959 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.75■□□□□ 0.91
PKP2Q99959 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
PKP2Q99959 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PKP2Q99959 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
PKP2Q99959 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PKP2Q99959 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
PKP2Q99959 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PKP2Q99959 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
PKP2Q99959 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.74■□□□□ 0.91
PKP2Q99959 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PKP2Q99959 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
PKP2Q99959 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.73■□□□□ 0.91
PKP2Q99959 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PKP2Q99959 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
PKP2Q99959 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PKP2Q99959 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC20.73■□□□□ 0.91
PKP2Q99959 CEP120-209ENST00000515110 606 ntTSL 3 BASIC20.73■□□□□ 0.91
PKP2Q99959 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PKP2Q99959 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PKP2Q99959 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PKP2Q99959 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.73■□□□□ 0.91
PKP2Q99959 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PKP2Q99959 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PKP2Q99959 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
PKP2Q99959 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PKP2Q99959 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PKP2Q99959 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PKP2Q99959 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC20.72■□□□□ 0.91
PKP2Q99959 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PKP2Q99959 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PKP2Q99959 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PKP2Q99959 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PKP2Q99959 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PKP2Q99959 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PKP2Q99959 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
PKP2Q99959 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PKP2Q99959 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.72■□□□□ 0.91
PKP2Q99959 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
PKP2Q99959 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
PKP2Q99959 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
PKP2Q99959 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
PKP2Q99959 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.71■□□□□ 0.91
PKP2Q99959 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PKP2Q99959 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PKP2Q99959 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.91
PKP2Q99959 AL157384.1-201ENST00000445995 2473 ntBASIC20.7■□□□□ 0.9
PKP2Q99959 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PKP2Q99959 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PKP2Q99959 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PKP2Q99959 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PKP2Q99959 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC20.7■□□□□ 0.9
PKP2Q99959 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PKP2Q99959 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PKP2Q99959 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PKP2Q99959 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PKP2Q99959 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PKP2Q99959 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PKP2Q99959 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PKP2Q99959 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC20.69■□□□□ 0.9
PKP2Q99959 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PKP2Q99959 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
PKP2Q99959 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PKP2Q99959 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PKP2Q99959 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
PKP2Q99959 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PKP2Q99959 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PKP2Q99959 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC20.69■□□□□ 0.9
PKP2Q99959 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PKP2Q99959 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PKP2Q99959 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.69■□□□□ 0.9
PKP2Q99959 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PKP2Q99959 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC20.68■□□□□ 0.9
PKP2Q99959 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PKP2Q99959 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PKP2Q99959 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
PKP2Q99959 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
PKP2Q99959 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.68■□□□□ 0.9
PKP2Q99959 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PKP2Q99959 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
PKP2Q99959 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PKP2Q99959 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC20.68■□□□□ 0.9
PKP2Q99959 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.68■□□□□ 0.9
PKP2Q99959 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PKP2Q99959 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.68■□□□□ 0.9
PKP2Q99959 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PKP2Q99959 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.68■□□□□ 0.9
PKP2Q99959 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PKP2Q99959 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
PKP2Q99959 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.67■□□□□ 0.9
PKP2Q99959 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PKP2Q99959 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PKP2Q99959 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
PKP2Q99959 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PKP2Q99959 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PKP2Q99959 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PKP2Q99959 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms