Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
ABCA3Q99758 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC29.97■■■□□ 2.39
ABCA3Q99758 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC29.97■■■□□ 2.39
ABCA3Q99758 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
ABCA3Q99758 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
ABCA3Q99758 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
ABCA3Q99758 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC29.96■■■□□ 2.39
ABCA3Q99758 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
ABCA3Q99758 AL121749.1-202ENST00000609313 2153 ntBASIC29.96■■■□□ 2.39
ABCA3Q99758 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
ABCA3Q99758 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC29.96■■■□□ 2.39
ABCA3Q99758 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
ABCA3Q99758 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
ABCA3Q99758 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
ABCA3Q99758 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC29.95■■■□□ 2.39
ABCA3Q99758 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC29.95■■■□□ 2.38
ABCA3Q99758 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC29.95■■■□□ 2.38
ABCA3Q99758 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC29.95■■■□□ 2.38
ABCA3Q99758 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
ABCA3Q99758 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
ABCA3Q99758 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
ABCA3Q99758 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
ABCA3Q99758 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
ABCA3Q99758 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
ABCA3Q99758 SMUG1P1-201ENST00000590640 811 ntBASIC29.93■■■□□ 2.38
ABCA3Q99758 UBE2DNL-204ENST00000602536 740 ntBASIC29.93■■■□□ 2.38
ABCA3Q99758 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC29.93■■■□□ 2.38
ABCA3Q99758 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
ABCA3Q99758 AC093827.2-201ENST00000512654 315 ntBASIC29.93■■■□□ 2.38
ABCA3Q99758 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC29.93■■■□□ 2.38
ABCA3Q99758 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC29.93■■■□□ 2.38
ABCA3Q99758 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC29.92■■■□□ 2.38
ABCA3Q99758 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC29.92■■■□□ 2.38
ABCA3Q99758 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC29.92■■■□□ 2.38
ABCA3Q99758 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
ABCA3Q99758 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC29.92■■■□□ 2.38
ABCA3Q99758 AC069152.1-201ENST00000438030 544 ntBASIC29.92■■■□□ 2.38
ABCA3Q99758 TSPY6P-201ENST00000448518 926 ntBASIC29.92■■■□□ 2.38
ABCA3Q99758 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC29.92■■■□□ 2.38
ABCA3Q99758 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC29.92■■■□□ 2.38
ABCA3Q99758 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
ABCA3Q99758 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
ABCA3Q99758 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
ABCA3Q99758 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
ABCA3Q99758 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC29.91■■■□□ 2.38
ABCA3Q99758 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC29.91■■■□□ 2.38
ABCA3Q99758 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC29.91■■■□□ 2.38
ABCA3Q99758 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC29.91■■■□□ 2.38
ABCA3Q99758 AL138781.1-201ENST00000566567 1274 ntBASIC29.91■■■□□ 2.38
ABCA3Q99758 CPT2-209ENST00000636935 803 ntTSL 5 BASIC29.91■■■□□ 2.38
ABCA3Q99758 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC29.91■■■□□ 2.38
ABCA3Q99758 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC29.91■■■□□ 2.38
ABCA3Q99758 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
ABCA3Q99758 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC29.91■■■□□ 2.38
ABCA3Q99758 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC29.91■■■□□ 2.38
ABCA3Q99758 AL121832.2-201ENST00000610979 668 ntBASIC29.91■■■□□ 2.38
ABCA3Q99758 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC29.9■■■□□ 2.38
ABCA3Q99758 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
ABCA3Q99758 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
ABCA3Q99758 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC29.9■■■□□ 2.38
ABCA3Q99758 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC29.9■■■□□ 2.38
ABCA3Q99758 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
ABCA3Q99758 TFG-210ENST00000620299 1289 ntTSL 5 BASIC29.9■■■□□ 2.38
ABCA3Q99758 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
ABCA3Q99758 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
ABCA3Q99758 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC29.89■■■□□ 2.38
ABCA3Q99758 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC29.89■■■□□ 2.38
ABCA3Q99758 EI24-213ENST00000618552 1747 ntTSL 5 BASIC29.88■■■□□ 2.37
ABCA3Q99758 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
ABCA3Q99758 DUX4L16-201ENST00000555130 1264 ntBASIC29.88■■■□□ 2.37
ABCA3Q99758 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
ABCA3Q99758 OAS3-207ENST00000551007 998 ntTSL 2 BASIC29.88■■■□□ 2.37
ABCA3Q99758 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC29.88■■■□□ 2.37
ABCA3Q99758 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
ABCA3Q99758 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
ABCA3Q99758 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
ABCA3Q99758 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC29.87■■■□□ 2.37
ABCA3Q99758 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC29.87■■■□□ 2.37
ABCA3Q99758 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
ABCA3Q99758 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC29.87■■■□□ 2.37
ABCA3Q99758 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
ABCA3Q99758 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
ABCA3Q99758 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
ABCA3Q99758 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
ABCA3Q99758 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
ABCA3Q99758 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC29.86■■■□□ 2.37
ABCA3Q99758 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC29.86■■■□□ 2.37
ABCA3Q99758 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC29.86■■■□□ 2.37
ABCA3Q99758 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
ABCA3Q99758 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC29.85■■■□□ 2.37
ABCA3Q99758 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC29.85■■■□□ 2.37
ABCA3Q99758 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC29.85■■■□□ 2.37
ABCA3Q99758 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
ABCA3Q99758 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
ABCA3Q99758 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC29.85■■■□□ 2.37
ABCA3Q99758 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC29.85■■■□□ 2.37
ABCA3Q99758 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC29.85■■■□□ 2.37
ABCA3Q99758 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC29.85■■■□□ 2.37
ABCA3Q99758 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC29.85■■■□□ 2.37
ABCA3Q99758 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms