Protein–RNA interactions for Protein: Q96NZ1

FOXN4, Forkhead box protein N4, humanhuman

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4Q96NZ1 MIR6724-4-201ENST00000617390 92 ntBASIC19.71■□□□□ 0.75
FOXN4Q96NZ1 MIR6724-3-201ENST00000622482 92 ntBASIC19.71■□□□□ 0.75
FOXN4Q96NZ1 EXOG-217ENST00000630638 197 ntTSL 5 BASIC19.71■□□□□ 0.75
FOXN4Q96NZ1 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
FOXN4Q96NZ1 AC009102.2-201ENST00000606772 1639 ntBASIC19.71■□□□□ 0.75
FOXN4Q96NZ1 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
FOXN4Q96NZ1 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
FOXN4Q96NZ1 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
FOXN4Q96NZ1 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
FOXN4Q96NZ1 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
FOXN4Q96NZ1 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
FOXN4Q96NZ1 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
FOXN4Q96NZ1 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
FOXN4Q96NZ1 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
FOXN4Q96NZ1 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
FOXN4Q96NZ1 TFPT-201ENST00000391757 774 ntTSL 5 BASIC19.7■□□□□ 0.74
FOXN4Q96NZ1 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
FOXN4Q96NZ1 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC19.7■□□□□ 0.74
FOXN4Q96NZ1 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
FOXN4Q96NZ1 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
FOXN4Q96NZ1 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
FOXN4Q96NZ1 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
FOXN4Q96NZ1 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
FOXN4Q96NZ1 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.7■□□□□ 0.74
FOXN4Q96NZ1 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
FOXN4Q96NZ1 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
FOXN4Q96NZ1 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.69■□□□□ 0.74
FOXN4Q96NZ1 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
FOXN4Q96NZ1 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.69■□□□□ 0.74
FOXN4Q96NZ1 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
FOXN4Q96NZ1 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
FOXN4Q96NZ1 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
FOXN4Q96NZ1 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
FOXN4Q96NZ1 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
FOXN4Q96NZ1 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
FOXN4Q96NZ1 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
FOXN4Q96NZ1 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
FOXN4Q96NZ1 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
FOXN4Q96NZ1 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
FOXN4Q96NZ1 LINC01529-204ENST00000636474 1715 ntBASIC19.68■□□□□ 0.74
FOXN4Q96NZ1 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.68■□□□□ 0.74
FOXN4Q96NZ1 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
FOXN4Q96NZ1 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC19.68■□□□□ 0.74
FOXN4Q96NZ1 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC19.68■□□□□ 0.74
FOXN4Q96NZ1 AC131281.2-201ENST00000520478 145 ntBASIC19.68■□□□□ 0.74
FOXN4Q96NZ1 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
FOXN4Q96NZ1 AL117332.1-201ENST00000622628 974 ntBASIC19.68■□□□□ 0.74
FOXN4Q96NZ1 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
FOXN4Q96NZ1 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
FOXN4Q96NZ1 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.67■□□□□ 0.74
FOXN4Q96NZ1 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.67■□□□□ 0.74
FOXN4Q96NZ1 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
FOXN4Q96NZ1 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
FOXN4Q96NZ1 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
FOXN4Q96NZ1 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC19.67■□□□□ 0.74
FOXN4Q96NZ1 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC19.67■□□□□ 0.74
FOXN4Q96NZ1 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.67■□□□□ 0.74
FOXN4Q96NZ1 MIR3621-201ENST00000580529 85 ntBASIC19.67■□□□□ 0.74
FOXN4Q96NZ1 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
FOXN4Q96NZ1 AL356740.2-201ENST00000601559 647 ntBASIC19.67■□□□□ 0.74
FOXN4Q96NZ1 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
FOXN4Q96NZ1 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
FOXN4Q96NZ1 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
FOXN4Q96NZ1 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
FOXN4Q96NZ1 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
FOXN4Q96NZ1 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.67■□□□□ 0.74
FOXN4Q96NZ1 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.67■□□□□ 0.74
FOXN4Q96NZ1 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
FOXN4Q96NZ1 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.67■□□□□ 0.74
FOXN4Q96NZ1 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
FOXN4Q96NZ1 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
FOXN4Q96NZ1 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.66■□□□□ 0.74
FOXN4Q96NZ1 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
FOXN4Q96NZ1 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
FOXN4Q96NZ1 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.66■□□□□ 0.74
FOXN4Q96NZ1 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
FOXN4Q96NZ1 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
FOXN4Q96NZ1 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
FOXN4Q96NZ1 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
FOXN4Q96NZ1 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
FOXN4Q96NZ1 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
FOXN4Q96NZ1 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC19.66■□□□□ 0.74
FOXN4Q96NZ1 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
FOXN4Q96NZ1 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC19.66■□□□□ 0.74
FOXN4Q96NZ1 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
FOXN4Q96NZ1 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
FOXN4Q96NZ1 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
FOXN4Q96NZ1 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
FOXN4Q96NZ1 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
FOXN4Q96NZ1 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.66■□□□□ 0.74
FOXN4Q96NZ1 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
FOXN4Q96NZ1 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
FOXN4Q96NZ1 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
FOXN4Q96NZ1 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
FOXN4Q96NZ1 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
FOXN4Q96NZ1 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.65■□□□□ 0.74
FOXN4Q96NZ1 AL136116.3-201ENST00000402907 1138 ntBASIC19.65■□□□□ 0.74
FOXN4Q96NZ1 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC19.65■□□□□ 0.74
FOXN4Q96NZ1 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC19.65■□□□□ 0.74
FOXN4Q96NZ1 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms