Protein–RNA interactions for Protein: Q96HJ5

MS4A3, Membrane-spanning 4-domains subfamily A member 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A3Q96HJ5 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.69■□□□□ 0.74
MS4A3Q96HJ5 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
MS4A3Q96HJ5 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
MS4A3Q96HJ5 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
MS4A3Q96HJ5 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
MS4A3Q96HJ5 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
MS4A3Q96HJ5 RPP21-222ENST00000433076 577 ntTSL 2 BASIC19.69■□□□□ 0.74
MS4A3Q96HJ5 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
MS4A3Q96HJ5 AC132872.1-201ENST00000566986 1195 ntBASIC19.69■□□□□ 0.74
MS4A3Q96HJ5 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
MS4A3Q96HJ5 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC19.69■□□□□ 0.74
MS4A3Q96HJ5 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
MS4A3Q96HJ5 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.69■□□□□ 0.74
MS4A3Q96HJ5 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
MS4A3Q96HJ5 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
MS4A3Q96HJ5 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
MS4A3Q96HJ5 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
MS4A3Q96HJ5 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
MS4A3Q96HJ5 QDPR-206ENST00000508623 601 ntTSL 3 BASIC19.68■□□□□ 0.74
MS4A3Q96HJ5 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
MS4A3Q96HJ5 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
MS4A3Q96HJ5 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
MS4A3Q96HJ5 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.68■□□□□ 0.74
MS4A3Q96HJ5 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.67■□□□□ 0.74
MS4A3Q96HJ5 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
MS4A3Q96HJ5 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MS4A3Q96HJ5 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MS4A3Q96HJ5 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
MS4A3Q96HJ5 Z97985.1-201ENST00000332270 946 ntBASIC19.67■□□□□ 0.74
MS4A3Q96HJ5 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC19.67■□□□□ 0.74
MS4A3Q96HJ5 AC131281.2-201ENST00000520478 145 ntBASIC19.67■□□□□ 0.74
MS4A3Q96HJ5 AL139317.3-201ENST00000555969 898 ntTSL 2 BASIC19.67■□□□□ 0.74
MS4A3Q96HJ5 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
MS4A3Q96HJ5 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MS4A3Q96HJ5 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MS4A3Q96HJ5 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.66■□□□□ 0.74
MS4A3Q96HJ5 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
MS4A3Q96HJ5 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.66■□□□□ 0.74
MS4A3Q96HJ5 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
MS4A3Q96HJ5 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MS4A3Q96HJ5 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MS4A3Q96HJ5 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
MS4A3Q96HJ5 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC19.66■□□□□ 0.74
MS4A3Q96HJ5 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
MS4A3Q96HJ5 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MS4A3Q96HJ5 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
MS4A3Q96HJ5 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC19.66■□□□□ 0.74
MS4A3Q96HJ5 AL512631.2-201ENST00000604634 923 ntBASIC19.66■□□□□ 0.74
MS4A3Q96HJ5 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC19.66■□□□□ 0.74
MS4A3Q96HJ5 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.66■□□□□ 0.74
MS4A3Q96HJ5 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.66■□□□□ 0.74
MS4A3Q96HJ5 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MS4A3Q96HJ5 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
MS4A3Q96HJ5 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MS4A3Q96HJ5 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MS4A3Q96HJ5 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
MS4A3Q96HJ5 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
MS4A3Q96HJ5 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
MS4A3Q96HJ5 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
MS4A3Q96HJ5 SLC25A24-204ENST00000569674 2357 ntBASIC19.65■□□□□ 0.74
MS4A3Q96HJ5 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
MS4A3Q96HJ5 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
MS4A3Q96HJ5 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
MS4A3Q96HJ5 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
MS4A3Q96HJ5 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
MS4A3Q96HJ5 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
MS4A3Q96HJ5 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
MS4A3Q96HJ5 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
MS4A3Q96HJ5 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.65■□□□□ 0.74
MS4A3Q96HJ5 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
MS4A3Q96HJ5 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
MS4A3Q96HJ5 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
MS4A3Q96HJ5 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
MS4A3Q96HJ5 AC009102.2-201ENST00000606772 1639 ntBASIC19.65■□□□□ 0.74
MS4A3Q96HJ5 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
MS4A3Q96HJ5 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.65■□□□□ 0.74
MS4A3Q96HJ5 LINC00526-201ENST00000581067 1875 ntBASIC19.65■□□□□ 0.74
MS4A3Q96HJ5 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
MS4A3Q96HJ5 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
MS4A3Q96HJ5 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.64■□□□□ 0.73
MS4A3Q96HJ5 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
MS4A3Q96HJ5 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.64■□□□□ 0.73
MS4A3Q96HJ5 MIR4466-201ENST00000606121 54 ntBASIC19.64■□□□□ 0.73
MS4A3Q96HJ5 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
MS4A3Q96HJ5 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
MS4A3Q96HJ5 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
MS4A3Q96HJ5 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
MS4A3Q96HJ5 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
MS4A3Q96HJ5 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
MS4A3Q96HJ5 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.64■□□□□ 0.73
MS4A3Q96HJ5 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
MS4A3Q96HJ5 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MS4A3Q96HJ5 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MS4A3Q96HJ5 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.63■□□□□ 0.73
MS4A3Q96HJ5 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.63■□□□□ 0.73
MS4A3Q96HJ5 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MS4A3Q96HJ5 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
MS4A3Q96HJ5 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
MS4A3Q96HJ5 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MS4A3Q96HJ5 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms