Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 AK3-203ENST00000447596 705 ntTSL 2 BASIC23.33■■□□□ 1.33
TRIM11Q96F44 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC23.33■■□□□ 1.33
TRIM11Q96F44 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC23.33■■□□□ 1.33
TRIM11Q96F44 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
TRIM11Q96F44 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
TRIM11Q96F44 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
TRIM11Q96F44 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC23.32■■□□□ 1.32
TRIM11Q96F44 AC241377.3-202ENST00000626088 1088 ntBASIC23.32■■□□□ 1.32
TRIM11Q96F44 AC241585.3-202ENST00000628937 1088 ntBASIC23.32■■□□□ 1.32
TRIM11Q96F44 AC245100.8-202ENST00000629247 1058 ntBASIC23.32■■□□□ 1.32
TRIM11Q96F44 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC23.32■■□□□ 1.32
TRIM11Q96F44 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
TRIM11Q96F44 LINC01960-201ENST00000563759 1884 ntBASIC23.32■■□□□ 1.32
TRIM11Q96F44 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
TRIM11Q96F44 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
TRIM11Q96F44 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
TRIM11Q96F44 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
TRIM11Q96F44 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC23.31■■□□□ 1.32
TRIM11Q96F44 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
TRIM11Q96F44 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC23.3■■□□□ 1.32
TRIM11Q96F44 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
TRIM11Q96F44 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC23.3■■□□□ 1.32
TRIM11Q96F44 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
TRIM11Q96F44 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
TRIM11Q96F44 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
TRIM11Q96F44 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
TRIM11Q96F44 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
TRIM11Q96F44 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
TRIM11Q96F44 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
TRIM11Q96F44 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
TRIM11Q96F44 AC004687.1-201ENST00000579003 1625 ntBASIC23.3■■□□□ 1.32
TRIM11Q96F44 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
TRIM11Q96F44 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
TRIM11Q96F44 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
TRIM11Q96F44 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
TRIM11Q96F44 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
TRIM11Q96F44 GUSBP5-201ENST00000418136 578 ntBASIC23.29■■□□□ 1.32
TRIM11Q96F44 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
TRIM11Q96F44 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC23.29■■□□□ 1.32
TRIM11Q96F44 AL499627.2-201ENST00000606283 725 ntBASIC23.29■■□□□ 1.32
TRIM11Q96F44 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
TRIM11Q96F44 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
TRIM11Q96F44 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC23.28■■□□□ 1.32
TRIM11Q96F44 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
TRIM11Q96F44 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC23.28■■□□□ 1.32
TRIM11Q96F44 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC23.28■■□□□ 1.32
TRIM11Q96F44 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
TRIM11Q96F44 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
TRIM11Q96F44 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
TRIM11Q96F44 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC23.28■■□□□ 1.32
TRIM11Q96F44 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC23.28■■□□□ 1.32
TRIM11Q96F44 TRIR-205ENST00000592273 783 ntTSL 3 BASIC23.28■■□□□ 1.32
TRIM11Q96F44 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
TRIM11Q96F44 AL356740.2-201ENST00000601559 647 ntBASIC23.28■■□□□ 1.32
TRIM11Q96F44 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
TRIM11Q96F44 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
TRIM11Q96F44 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
TRIM11Q96F44 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC23.28■■□□□ 1.32
TRIM11Q96F44 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
TRIM11Q96F44 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
TRIM11Q96F44 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
TRIM11Q96F44 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
TRIM11Q96F44 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC23.27■■□□□ 1.32
TRIM11Q96F44 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
TRIM11Q96F44 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
TRIM11Q96F44 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
TRIM11Q96F44 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
TRIM11Q96F44 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
TRIM11Q96F44 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
TRIM11Q96F44 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
TRIM11Q96F44 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC23.27■■□□□ 1.32
TRIM11Q96F44 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
TRIM11Q96F44 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
TRIM11Q96F44 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TRIM11Q96F44 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
TRIM11Q96F44 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TRIM11Q96F44 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC23.26■■□□□ 1.31
TRIM11Q96F44 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC23.26■■□□□ 1.31
TRIM11Q96F44 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC23.26■■□□□ 1.31
TRIM11Q96F44 AC139530.1-201ENST00000575312 1977 ntBASIC23.26■■□□□ 1.31
TRIM11Q96F44 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TRIM11Q96F44 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC23.26■■□□□ 1.31
TRIM11Q96F44 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
TRIM11Q96F44 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TRIM11Q96F44 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC23.26■■□□□ 1.31
TRIM11Q96F44 AC092053.2-201ENST00000640557 1818 ntBASIC23.26■■□□□ 1.31
TRIM11Q96F44 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TRIM11Q96F44 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC23.26■■□□□ 1.31
TRIM11Q96F44 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TRIM11Q96F44 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC23.25■■□□□ 1.31
TRIM11Q96F44 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC23.25■■□□□ 1.31
TRIM11Q96F44 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC23.25■■□□□ 1.31
TRIM11Q96F44 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
TRIM11Q96F44 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC23.25■■□□□ 1.31
TRIM11Q96F44 STK25-234ENST00000535007 2459 ntTSL 2 BASIC23.25■■□□□ 1.31
TRIM11Q96F44 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
TRIM11Q96F44 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC23.25■■□□□ 1.31
TRIM11Q96F44 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
TRIM11Q96F44 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
TRIM11Q96F44 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms