Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
MBD3L1Q8WWY6 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
MBD3L1Q8WWY6 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC17.32■□□□□ 0.36
MBD3L1Q8WWY6 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
MBD3L1Q8WWY6 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MBD3L1Q8WWY6 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MBD3L1Q8WWY6 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
MBD3L1Q8WWY6 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC17.31■□□□□ 0.36
MBD3L1Q8WWY6 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC17.31■□□□□ 0.36
MBD3L1Q8WWY6 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
MBD3L1Q8WWY6 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
MBD3L1Q8WWY6 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
MBD3L1Q8WWY6 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
MBD3L1Q8WWY6 RNF166-209ENST00000567844 633 ntTSL 5 BASIC17.31■□□□□ 0.36
MBD3L1Q8WWY6 AC026202.3-201ENST00000600805 1127 ntBASIC17.31■□□□□ 0.36
MBD3L1Q8WWY6 RAP2CP1-202ENST00000605179 643 ntBASIC17.31■□□□□ 0.36
MBD3L1Q8WWY6 CR559946.2-201ENST00000623684 991 ntBASIC17.31■□□□□ 0.36
MBD3L1Q8WWY6 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MBD3L1Q8WWY6 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MBD3L1Q8WWY6 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MBD3L1Q8WWY6 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC17.31■□□□□ 0.36
MBD3L1Q8WWY6 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
MBD3L1Q8WWY6 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MBD3L1Q8WWY6 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC17.31■□□□□ 0.36
MBD3L1Q8WWY6 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MBD3L1Q8WWY6 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MBD3L1Q8WWY6 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC17.3■□□□□ 0.36
MBD3L1Q8WWY6 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MBD3L1Q8WWY6 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MBD3L1Q8WWY6 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC17.3■□□□□ 0.36
MBD3L1Q8WWY6 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC17.3■□□□□ 0.36
MBD3L1Q8WWY6 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
MBD3L1Q8WWY6 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC17.3■□□□□ 0.36
MBD3L1Q8WWY6 GFER-205ENST00000569451 517 ntTSL 5 BASIC17.3■□□□□ 0.36
MBD3L1Q8WWY6 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MBD3L1Q8WWY6 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MBD3L1Q8WWY6 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
MBD3L1Q8WWY6 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC17.29■□□□□ 0.36
MBD3L1Q8WWY6 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
MBD3L1Q8WWY6 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MBD3L1Q8WWY6 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
MBD3L1Q8WWY6 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
MBD3L1Q8WWY6 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
MBD3L1Q8WWY6 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC17.29■□□□□ 0.36
MBD3L1Q8WWY6 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
MBD3L1Q8WWY6 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
MBD3L1Q8WWY6 AL592295.1-201ENST00000400984 884 ntBASIC17.29■□□□□ 0.36
MBD3L1Q8WWY6 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC17.29■□□□□ 0.36
MBD3L1Q8WWY6 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MBD3L1Q8WWY6 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
MBD3L1Q8WWY6 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
MBD3L1Q8WWY6 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC17.29■□□□□ 0.36
MBD3L1Q8WWY6 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MBD3L1Q8WWY6 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MBD3L1Q8WWY6 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MBD3L1Q8WWY6 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
MBD3L1Q8WWY6 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
MBD3L1Q8WWY6 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
MBD3L1Q8WWY6 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
MBD3L1Q8WWY6 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC17.28■□□□□ 0.36
MBD3L1Q8WWY6 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
MBD3L1Q8WWY6 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
MBD3L1Q8WWY6 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC17.28■□□□□ 0.36
MBD3L1Q8WWY6 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC17.27■□□□□ 0.36
MBD3L1Q8WWY6 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
MBD3L1Q8WWY6 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
MBD3L1Q8WWY6 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
MBD3L1Q8WWY6 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
MBD3L1Q8WWY6 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
MBD3L1Q8WWY6 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
MBD3L1Q8WWY6 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
MBD3L1Q8WWY6 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
MBD3L1Q8WWY6 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
MBD3L1Q8WWY6 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
MBD3L1Q8WWY6 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC17.27■□□□□ 0.35
MBD3L1Q8WWY6 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC17.27■□□□□ 0.35
MBD3L1Q8WWY6 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
MBD3L1Q8WWY6 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
MBD3L1Q8WWY6 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
MBD3L1Q8WWY6 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MBD3L1Q8WWY6 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
MBD3L1Q8WWY6 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
MBD3L1Q8WWY6 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
MBD3L1Q8WWY6 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MBD3L1Q8WWY6 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MBD3L1Q8WWY6 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MBD3L1Q8WWY6 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC17.26■□□□□ 0.35
MBD3L1Q8WWY6 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MBD3L1Q8WWY6 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC17.26■□□□□ 0.35
MBD3L1Q8WWY6 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC17.26■□□□□ 0.35
MBD3L1Q8WWY6 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
MBD3L1Q8WWY6 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MBD3L1Q8WWY6 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MBD3L1Q8WWY6 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC17.25■□□□□ 0.35
MBD3L1Q8WWY6 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
MBD3L1Q8WWY6 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
MBD3L1Q8WWY6 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
MBD3L1Q8WWY6 AL157384.1-201ENST00000445995 2473 ntBASIC17.25■□□□□ 0.35
MBD3L1Q8WWY6 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
MBD3L1Q8WWY6 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 199.5 ms