Protein–RNA interactions for Protein: Q8WWH5

TRUB1, Probable tRNA pseudouridine synthase 1, humanhuman

Known RBP Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1Q8WWH5 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TRUB1Q8WWH5 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.2■□□□□ 0.82
TRUB1Q8WWH5 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRUB1Q8WWH5 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
TRUB1Q8WWH5 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRUB1Q8WWH5 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRUB1Q8WWH5 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TRUB1Q8WWH5 AL353803.4-201ENST00000565882 1934 ntBASIC20.19■□□□□ 0.82
TRUB1Q8WWH5 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRUB1Q8WWH5 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TRUB1Q8WWH5 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRUB1Q8WWH5 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.19■□□□□ 0.82
TRUB1Q8WWH5 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.19■□□□□ 0.82
TRUB1Q8WWH5 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
TRUB1Q8WWH5 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRUB1Q8WWH5 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TRUB1Q8WWH5 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.19■□□□□ 0.82
TRUB1Q8WWH5 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRUB1Q8WWH5 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.19■□□□□ 0.82
TRUB1Q8WWH5 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.18■□□□□ 0.82
TRUB1Q8WWH5 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TRUB1Q8WWH5 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.18■□□□□ 0.82
TRUB1Q8WWH5 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRUB1Q8WWH5 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TRUB1Q8WWH5 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRUB1Q8WWH5 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRUB1Q8WWH5 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.17■□□□□ 0.82
TRUB1Q8WWH5 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.17■□□□□ 0.82
TRUB1Q8WWH5 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.17■□□□□ 0.82
TRUB1Q8WWH5 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRUB1Q8WWH5 AC022616.5-201ENST00000518796 181 ntBASIC20.17■□□□□ 0.82
TRUB1Q8WWH5 PVT1-219ENST00000523427 938 ntTSL 3 BASIC20.17■□□□□ 0.82
TRUB1Q8WWH5 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRUB1Q8WWH5 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.17■□□□□ 0.82
TRUB1Q8WWH5 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRUB1Q8WWH5 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRUB1Q8WWH5 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRUB1Q8WWH5 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
TRUB1Q8WWH5 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.16■□□□□ 0.82
TRUB1Q8WWH5 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TRUB1Q8WWH5 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRUB1Q8WWH5 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRUB1Q8WWH5 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TRUB1Q8WWH5 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
TRUB1Q8WWH5 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.16■□□□□ 0.82
TRUB1Q8WWH5 RNF126P1-201ENST00000567452 1320 ntBASIC20.16■□□□□ 0.82
TRUB1Q8WWH5 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRUB1Q8WWH5 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TRUB1Q8WWH5 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRUB1Q8WWH5 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.15■□□□□ 0.82
TRUB1Q8WWH5 DUX4L9-201ENST00000449051 1259 ntBASIC20.15■□□□□ 0.82
TRUB1Q8WWH5 MIR4449-201ENST00000578365 66 ntBASIC20.15■□□□□ 0.82
TRUB1Q8WWH5 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRUB1Q8WWH5 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
TRUB1Q8WWH5 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TRUB1Q8WWH5 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
TRUB1Q8WWH5 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRUB1Q8WWH5 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRUB1Q8WWH5 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRUB1Q8WWH5 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
TRUB1Q8WWH5 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
TRUB1Q8WWH5 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRUB1Q8WWH5 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRUB1Q8WWH5 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.14■□□□□ 0.81
TRUB1Q8WWH5 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRUB1Q8WWH5 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRUB1Q8WWH5 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC20.14■□□□□ 0.81
TRUB1Q8WWH5 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TRUB1Q8WWH5 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
TRUB1Q8WWH5 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
TRUB1Q8WWH5 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRUB1Q8WWH5 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TRUB1Q8WWH5 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRUB1Q8WWH5 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
TRUB1Q8WWH5 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
TRUB1Q8WWH5 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRUB1Q8WWH5 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRUB1Q8WWH5 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.13■□□□□ 0.81
TRUB1Q8WWH5 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRUB1Q8WWH5 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRUB1Q8WWH5 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TRUB1Q8WWH5 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRUB1Q8WWH5 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
TRUB1Q8WWH5 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
TRUB1Q8WWH5 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRUB1Q8WWH5 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TRUB1Q8WWH5 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRUB1Q8WWH5 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRUB1Q8WWH5 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
TRUB1Q8WWH5 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
TRUB1Q8WWH5 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
TRUB1Q8WWH5 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRUB1Q8WWH5 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRUB1Q8WWH5 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRUB1Q8WWH5 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRUB1Q8WWH5 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC20.12■□□□□ 0.81
TRUB1Q8WWH5 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC20.12■□□□□ 0.81
TRUB1Q8WWH5 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.12■□□□□ 0.81
TRUB1Q8WWH5 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TRUB1Q8WWH5 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms