Protein–RNA interactions for Protein: Q8WWA1

TMEM40, Transmembrane protein 40, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40Q8WWA1 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
TMEM40Q8WWA1 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
TMEM40Q8WWA1 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC24.2■■□□□ 1.46
TMEM40Q8WWA1 NT5C3AP1-201ENST00000394500 1012 ntBASIC24.2■■□□□ 1.46
TMEM40Q8WWA1 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
TMEM40Q8WWA1 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC24.2■■□□□ 1.46
TMEM40Q8WWA1 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC24.2■■□□□ 1.46
TMEM40Q8WWA1 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC24.2■■□□□ 1.46
TMEM40Q8WWA1 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
TMEM40Q8WWA1 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC24.2■■□□□ 1.46
TMEM40Q8WWA1 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC24.2■■□□□ 1.46
TMEM40Q8WWA1 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
TMEM40Q8WWA1 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC24.19■■□□□ 1.46
TMEM40Q8WWA1 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
TMEM40Q8WWA1 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
TMEM40Q8WWA1 MPST-204ENST00000404393 1329 ntTSL 5 BASIC24.19■■□□□ 1.46
TMEM40Q8WWA1 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
TMEM40Q8WWA1 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
TMEM40Q8WWA1 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC24.19■■□□□ 1.46
TMEM40Q8WWA1 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC24.19■■□□□ 1.46
TMEM40Q8WWA1 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC24.19■■□□□ 1.46
TMEM40Q8WWA1 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC24.19■■□□□ 1.46
TMEM40Q8WWA1 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
TMEM40Q8WWA1 KRT18P14-201ENST00000534205 1250 ntBASIC24.19■■□□□ 1.46
TMEM40Q8WWA1 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC24.19■■□□□ 1.46
TMEM40Q8WWA1 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
TMEM40Q8WWA1 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
TMEM40Q8WWA1 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC24.19■■□□□ 1.46
TMEM40Q8WWA1 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC24.19■■□□□ 1.46
TMEM40Q8WWA1 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
TMEM40Q8WWA1 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
TMEM40Q8WWA1 LINC02228-203ENST00000641970 1355 ntBASIC24.18■■□□□ 1.46
TMEM40Q8WWA1 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC24.18■■□□□ 1.46
TMEM40Q8WWA1 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
TMEM40Q8WWA1 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
TMEM40Q8WWA1 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
TMEM40Q8WWA1 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC24.18■■□□□ 1.46
TMEM40Q8WWA1 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC24.18■■□□□ 1.46
TMEM40Q8WWA1 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC24.18■■□□□ 1.46
TMEM40Q8WWA1 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC24.18■■□□□ 1.46
TMEM40Q8WWA1 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC24.18■■□□□ 1.46
TMEM40Q8WWA1 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC24.18■■□□□ 1.46
TMEM40Q8WWA1 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC24.18■■□□□ 1.46
TMEM40Q8WWA1 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
TMEM40Q8WWA1 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
TMEM40Q8WWA1 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
TMEM40Q8WWA1 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
TMEM40Q8WWA1 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
TMEM40Q8WWA1 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
TMEM40Q8WWA1 EI24-211ENST00000534546 1544 ntTSL 2 BASIC24.17■■□□□ 1.46
TMEM40Q8WWA1 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
TMEM40Q8WWA1 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC24.17■■□□□ 1.46
TMEM40Q8WWA1 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC24.17■■□□□ 1.46
TMEM40Q8WWA1 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
TMEM40Q8WWA1 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
TMEM40Q8WWA1 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC24.17■■□□□ 1.46
TMEM40Q8WWA1 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
TMEM40Q8WWA1 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
TMEM40Q8WWA1 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC24.16■■□□□ 1.46
TMEM40Q8WWA1 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
TMEM40Q8WWA1 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC24.16■■□□□ 1.46
TMEM40Q8WWA1 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
TMEM40Q8WWA1 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
TMEM40Q8WWA1 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
TMEM40Q8WWA1 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC24.15■■□□□ 1.46
TMEM40Q8WWA1 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC24.15■■□□□ 1.46
TMEM40Q8WWA1 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC24.15■■□□□ 1.46
TMEM40Q8WWA1 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
TMEM40Q8WWA1 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC24.15■■□□□ 1.46
TMEM40Q8WWA1 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
TMEM40Q8WWA1 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
TMEM40Q8WWA1 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC24.14■■□□□ 1.46
TMEM40Q8WWA1 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
TMEM40Q8WWA1 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC24.14■■□□□ 1.45
TMEM40Q8WWA1 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC24.14■■□□□ 1.45
TMEM40Q8WWA1 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
TMEM40Q8WWA1 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC24.14■■□□□ 1.45
TMEM40Q8WWA1 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC24.14■■□□□ 1.45
TMEM40Q8WWA1 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC24.14■■□□□ 1.45
TMEM40Q8WWA1 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
TMEM40Q8WWA1 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC24.14■■□□□ 1.45
TMEM40Q8WWA1 NTF6G-201ENST00000591094 616 ntBASIC24.14■■□□□ 1.45
TMEM40Q8WWA1 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
TMEM40Q8WWA1 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC24.14■■□□□ 1.45
TMEM40Q8WWA1 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
TMEM40Q8WWA1 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC24.13■■□□□ 1.45
TMEM40Q8WWA1 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC24.13■■□□□ 1.45
TMEM40Q8WWA1 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC24.13■■□□□ 1.45
TMEM40Q8WWA1 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC24.13■■□□□ 1.45
TMEM40Q8WWA1 AL137784.2-201ENST00000607332 1000 ntBASIC24.13■■□□□ 1.45
TMEM40Q8WWA1 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC24.13■■□□□ 1.45
TMEM40Q8WWA1 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
TMEM40Q8WWA1 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC24.13■■□□□ 1.45
TMEM40Q8WWA1 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC24.12■■□□□ 1.45
TMEM40Q8WWA1 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
TMEM40Q8WWA1 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC24.12■■□□□ 1.45
TMEM40Q8WWA1 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC24.12■■□□□ 1.45
TMEM40Q8WWA1 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
TMEM40Q8WWA1 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
TMEM40Q8WWA1 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms