Protein–RNA interactions for Protein: Q8N6N2

TTC9B, Tetratricopeptide repeat protein 9B, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9BQ8N6N2 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC23.28■■□□□ 1.32
TTC9BQ8N6N2 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC23.28■■□□□ 1.32
TTC9BQ8N6N2 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
TTC9BQ8N6N2 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC23.28■■□□□ 1.32
TTC9BQ8N6N2 DUX4L2-201ENST00000561772 1275 ntBASIC23.28■■□□□ 1.32
TTC9BQ8N6N2 AL354811.1-201ENST00000610286 706 ntBASIC23.28■■□□□ 1.32
TTC9BQ8N6N2 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC23.28■■□□□ 1.32
TTC9BQ8N6N2 DUX4L6-201ENST00000626483 1275 ntBASIC23.28■■□□□ 1.32
TTC9BQ8N6N2 DUX4L1-201ENST00000627662 1275 ntBASIC23.28■■□□□ 1.32
TTC9BQ8N6N2 DUX4L8-201ENST00000629013 1275 ntBASIC23.28■■□□□ 1.32
TTC9BQ8N6N2 DUX4L3-201ENST00000630187 1275 ntBASIC23.28■■□□□ 1.32
TTC9BQ8N6N2 DUX4L7-201ENST00000630678 1275 ntBASIC23.28■■□□□ 1.32
TTC9BQ8N6N2 DUX4L5-201ENST00000630834 1275 ntBASIC23.28■■□□□ 1.32
TTC9BQ8N6N2 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
TTC9BQ8N6N2 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC23.28■■□□□ 1.32
TTC9BQ8N6N2 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
TTC9BQ8N6N2 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
TTC9BQ8N6N2 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC23.27■■□□□ 1.32
TTC9BQ8N6N2 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
TTC9BQ8N6N2 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
TTC9BQ8N6N2 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
TTC9BQ8N6N2 LHPP-203ENST00000392757 840 ntTSL 3 BASIC23.27■■□□□ 1.32
TTC9BQ8N6N2 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
TTC9BQ8N6N2 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
TTC9BQ8N6N2 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
TTC9BQ8N6N2 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
TTC9BQ8N6N2 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC23.27■■□□□ 1.31
TTC9BQ8N6N2 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
TTC9BQ8N6N2 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC23.26■■□□□ 1.31
TTC9BQ8N6N2 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC23.26■■□□□ 1.31
TTC9BQ8N6N2 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
TTC9BQ8N6N2 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
TTC9BQ8N6N2 AC034268.1-201ENST00000441047 882 ntBASIC23.26■■□□□ 1.31
TTC9BQ8N6N2 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC23.26■■□□□ 1.31
TTC9BQ8N6N2 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC23.26■■□□□ 1.31
TTC9BQ8N6N2 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC23.26■■□□□ 1.31
TTC9BQ8N6N2 EI24-211ENST00000534546 1544 ntTSL 2 BASIC23.26■■□□□ 1.31
TTC9BQ8N6N2 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TTC9BQ8N6N2 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TTC9BQ8N6N2 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
TTC9BQ8N6N2 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC23.25■■□□□ 1.31
TTC9BQ8N6N2 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC23.25■■□□□ 1.31
TTC9BQ8N6N2 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
TTC9BQ8N6N2 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
TTC9BQ8N6N2 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
TTC9BQ8N6N2 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC23.25■■□□□ 1.31
TTC9BQ8N6N2 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
TTC9BQ8N6N2 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
TTC9BQ8N6N2 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
TTC9BQ8N6N2 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC23.25■■□□□ 1.31
TTC9BQ8N6N2 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC23.25■■□□□ 1.31
TTC9BQ8N6N2 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC23.25■■□□□ 1.31
TTC9BQ8N6N2 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
TTC9BQ8N6N2 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
TTC9BQ8N6N2 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
TTC9BQ8N6N2 RARA-203ENST00000394086 2008 ntTSL 2 BASIC23.25■■□□□ 1.31
TTC9BQ8N6N2 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
TTC9BQ8N6N2 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
TTC9BQ8N6N2 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TTC9BQ8N6N2 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TTC9BQ8N6N2 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC23.24■■□□□ 1.31
TTC9BQ8N6N2 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TTC9BQ8N6N2 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC23.24■■□□□ 1.31
TTC9BQ8N6N2 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
TTC9BQ8N6N2 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC23.24■■□□□ 1.31
TTC9BQ8N6N2 AC105233.4-201ENST00000642045 216 ntBASIC23.24■■□□□ 1.31
TTC9BQ8N6N2 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TTC9BQ8N6N2 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
TTC9BQ8N6N2 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
TTC9BQ8N6N2 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
TTC9BQ8N6N2 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC23.24■■□□□ 1.31
TTC9BQ8N6N2 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
TTC9BQ8N6N2 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
TTC9BQ8N6N2 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC23.23■■□□□ 1.31
TTC9BQ8N6N2 KRT18P5-201ENST00000436075 1291 ntBASIC23.23■■□□□ 1.31
TTC9BQ8N6N2 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC23.23■■□□□ 1.31
TTC9BQ8N6N2 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC23.23■■□□□ 1.31
TTC9BQ8N6N2 CCDC92B-201ENST00000575506 885 ntBASIC23.23■■□□□ 1.31
TTC9BQ8N6N2 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC23.23■■□□□ 1.31
TTC9BQ8N6N2 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC23.23■■□□□ 1.31
TTC9BQ8N6N2 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
TTC9BQ8N6N2 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC23.22■■□□□ 1.31
TTC9BQ8N6N2 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC23.22■■□□□ 1.31
TTC9BQ8N6N2 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
TTC9BQ8N6N2 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC23.22■■□□□ 1.31
TTC9BQ8N6N2 AC123595.1-201ENST00000440769 1046 ntBASIC23.22■■□□□ 1.31
TTC9BQ8N6N2 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
TTC9BQ8N6N2 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC23.22■■□□□ 1.31
TTC9BQ8N6N2 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC23.22■■□□□ 1.31
TTC9BQ8N6N2 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
TTC9BQ8N6N2 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC23.22■■□□□ 1.31
TTC9BQ8N6N2 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC23.22■■□□□ 1.31
TTC9BQ8N6N2 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC23.21■■□□□ 1.31
TTC9BQ8N6N2 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TTC9BQ8N6N2 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
TTC9BQ8N6N2 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
TTC9BQ8N6N2 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC23.21■■□□□ 1.31
TTC9BQ8N6N2 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC23.21■■□□□ 1.31
TTC9BQ8N6N2 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TTC9BQ8N6N2 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms