Protein–RNA interactions for Protein: Q8N228

SCML4, Sex comb on midleg-like protein 4, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4Q8N228 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC23.07■■□□□ 1.28
SCML4Q8N228 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
SCML4Q8N228 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SCML4Q8N228 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SCML4Q8N228 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SCML4Q8N228 EBPL-204ENST00000378272 766 ntTSL 3 BASIC23.07■■□□□ 1.28
SCML4Q8N228 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
SCML4Q8N228 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
SCML4Q8N228 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
SCML4Q8N228 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
SCML4Q8N228 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC23.06■■□□□ 1.28
SCML4Q8N228 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
SCML4Q8N228 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
SCML4Q8N228 RARA-203ENST00000394086 2008 ntTSL 2 BASIC23.05■■□□□ 1.28
SCML4Q8N228 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
SCML4Q8N228 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
SCML4Q8N228 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC23.05■■□□□ 1.28
SCML4Q8N228 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SCML4Q8N228 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SCML4Q8N228 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SCML4Q8N228 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SCML4Q8N228 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
SCML4Q8N228 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
SCML4Q8N228 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC23.04■■□□□ 1.28
SCML4Q8N228 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
SCML4Q8N228 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
SCML4Q8N228 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
SCML4Q8N228 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
SCML4Q8N228 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
SCML4Q8N228 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
SCML4Q8N228 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
SCML4Q8N228 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SCML4Q8N228 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SCML4Q8N228 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC23.03■■□□□ 1.28
SCML4Q8N228 RBM38-205ENST00000440234 686 ntTSL 2 BASIC23.03■■□□□ 1.28
SCML4Q8N228 AICDA-202ENST00000537228 667 ntTSL 5 BASIC23.03■■□□□ 1.28
SCML4Q8N228 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC23.03■■□□□ 1.28
SCML4Q8N228 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
SCML4Q8N228 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC23.03■■□□□ 1.28
SCML4Q8N228 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SCML4Q8N228 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC23.03■■□□□ 1.28
SCML4Q8N228 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
SCML4Q8N228 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SCML4Q8N228 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
SCML4Q8N228 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC23.02■■□□□ 1.28
SCML4Q8N228 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC23.02■■□□□ 1.28
SCML4Q8N228 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
SCML4Q8N228 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC23.02■■□□□ 1.28
SCML4Q8N228 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC23.02■■□□□ 1.28
SCML4Q8N228 IGHV3-19-201ENST00000521488 291 ntBASIC23.02■■□□□ 1.28
SCML4Q8N228 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC23.02■■□□□ 1.28
SCML4Q8N228 AC126544.1-201ENST00000580842 1059 ntBASIC23.02■■□□□ 1.28
SCML4Q8N228 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC23.02■■□□□ 1.28
SCML4Q8N228 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
SCML4Q8N228 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
SCML4Q8N228 AC019069.1-201ENST00000610008 1333 ntBASIC23.02■■□□□ 1.28
SCML4Q8N228 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC23.01■■□□□ 1.27
SCML4Q8N228 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
SCML4Q8N228 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SCML4Q8N228 HYI-206ENST00000372434 1025 ntTSL 5 BASIC23.01■■□□□ 1.27
SCML4Q8N228 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
SCML4Q8N228 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
SCML4Q8N228 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SCML4Q8N228 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SCML4Q8N228 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
SCML4Q8N228 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC23■■□□□ 1.27
SCML4Q8N228 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
SCML4Q8N228 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
SCML4Q8N228 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
SCML4Q8N228 EI24-211ENST00000534546 1544 ntTSL 2 BASIC23■■□□□ 1.27
SCML4Q8N228 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC23■■□□□ 1.27
SCML4Q8N228 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
SCML4Q8N228 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC23■■□□□ 1.27
SCML4Q8N228 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC23■■□□□ 1.27
SCML4Q8N228 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC23■■□□□ 1.27
SCML4Q8N228 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
SCML4Q8N228 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC23■■□□□ 1.27
SCML4Q8N228 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC23■■□□□ 1.27
SCML4Q8N228 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC23■■□□□ 1.27
SCML4Q8N228 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
SCML4Q8N228 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
SCML4Q8N228 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC22.99■■□□□ 1.27
SCML4Q8N228 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC22.99■■□□□ 1.27
SCML4Q8N228 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC22.99■■□□□ 1.27
SCML4Q8N228 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
SCML4Q8N228 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC22.99■■□□□ 1.27
SCML4Q8N228 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
SCML4Q8N228 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC22.99■■□□□ 1.27
SCML4Q8N228 GRAMD4P2-201ENST00000423297 1097 ntBASIC22.99■■□□□ 1.27
SCML4Q8N228 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC22.99■■□□□ 1.27
SCML4Q8N228 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
SCML4Q8N228 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC22.99■■□□□ 1.27
SCML4Q8N228 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC22.98■■□□□ 1.27
SCML4Q8N228 USP45-205ENST00000472914 1617 ntTSL 5 BASIC22.98■■□□□ 1.27
SCML4Q8N228 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SCML4Q8N228 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SCML4Q8N228 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC22.98■■□□□ 1.27
SCML4Q8N228 AC105265.2-201ENST00000467189 838 ntBASIC22.98■■□□□ 1.27
SCML4Q8N228 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
SCML4Q8N228 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms