Protein–RNA interactions for Protein: Q8IY21

DDX60, Probable ATP-dependent RNA helicase DDX60, humanhuman

Known RBP Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60Q8IY21 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
DDX60Q8IY21 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC27.6■■■□□ 2.01
DDX60Q8IY21 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC27.6■■■□□ 2.01
DDX60Q8IY21 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC27.6■■■□□ 2.01
DDX60Q8IY21 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
DDX60Q8IY21 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
DDX60Q8IY21 MPST-204ENST00000404393 1329 ntTSL 5 BASIC27.6■■■□□ 2.01
DDX60Q8IY21 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC27.6■■■□□ 2.01
DDX60Q8IY21 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
DDX60Q8IY21 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC27.59■■■□□ 2.01
DDX60Q8IY21 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC27.59■■■□□ 2.01
DDX60Q8IY21 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC27.59■■■□□ 2.01
DDX60Q8IY21 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC27.59■■■□□ 2.01
DDX60Q8IY21 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
DDX60Q8IY21 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC27.59■■■□□ 2.01
DDX60Q8IY21 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
DDX60Q8IY21 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC27.58■■■□□ 2.01
DDX60Q8IY21 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC27.58■■■□□ 2.01
DDX60Q8IY21 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC27.58■■■□□ 2.01
DDX60Q8IY21 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC27.58■■■□□ 2.01
DDX60Q8IY21 AC105233.4-201ENST00000642045 216 ntBASIC27.58■■■□□ 2.01
DDX60Q8IY21 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
DDX60Q8IY21 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC27.58■■■□□ 2.01
DDX60Q8IY21 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC27.58■■■□□ 2.01
DDX60Q8IY21 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
DDX60Q8IY21 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC27.58■■■□□ 2.01
DDX60Q8IY21 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC27.58■■■□□ 2.01
DDX60Q8IY21 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2
DDX60Q8IY21 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC27.57■■■□□ 2
DDX60Q8IY21 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC27.57■■■□□ 2
DDX60Q8IY21 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
DDX60Q8IY21 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC27.57■■■□□ 2
DDX60Q8IY21 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC27.57■■■□□ 2
DDX60Q8IY21 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC27.57■■■□□ 2
DDX60Q8IY21 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC27.56■■■□□ 2
DDX60Q8IY21 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC27.56■■■□□ 2
DDX60Q8IY21 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC27.56■■■□□ 2
DDX60Q8IY21 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
DDX60Q8IY21 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC27.56■■■□□ 2
DDX60Q8IY21 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC27.56■■■□□ 2
DDX60Q8IY21 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC27.56■■■□□ 2
DDX60Q8IY21 MFF-208ENST00000409616 1247 ntTSL 5 BASIC27.55■■■□□ 2
DDX60Q8IY21 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC27.55■■■□□ 2
DDX60Q8IY21 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
DDX60Q8IY21 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC27.55■■■□□ 2
DDX60Q8IY21 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC27.54■■■□□ 2
DDX60Q8IY21 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC27.54■■■□□ 2
DDX60Q8IY21 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC27.54■■■□□ 2
DDX60Q8IY21 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC27.54■■■□□ 2
DDX60Q8IY21 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
DDX60Q8IY21 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC27.53■■■□□ 2
DDX60Q8IY21 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC27.53■■■□□ 2
DDX60Q8IY21 AC004911.1-201ENST00000416316 871 ntBASIC27.53■■■□□ 2
DDX60Q8IY21 AC093323.1-202ENST00000635031 2045 ntBASIC27.52■■■□□ 2
DDX60Q8IY21 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
DDX60Q8IY21 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC27.52■■■□□ 2
DDX60Q8IY21 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
DDX60Q8IY21 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC27.52■■■□□ 2
DDX60Q8IY21 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC27.52■■■□□ 2
DDX60Q8IY21 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC27.52■■■□□ 2
DDX60Q8IY21 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC27.52■■■□□ 2
DDX60Q8IY21 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC27.52■■■□□ 2
DDX60Q8IY21 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC27.52■■■□□ 2
DDX60Q8IY21 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC27.52■■■□□ 2
DDX60Q8IY21 RARA-203ENST00000394086 2008 ntTSL 2 BASIC27.51■■□□□ 1.99
DDX60Q8IY21 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC27.51■■□□□ 1.99
DDX60Q8IY21 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC27.51■■□□□ 1.99
DDX60Q8IY21 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC27.51■■□□□ 1.99
DDX60Q8IY21 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC27.51■■□□□ 1.99
DDX60Q8IY21 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
DDX60Q8IY21 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC27.51■■□□□ 1.99
DDX60Q8IY21 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC27.51■■□□□ 1.99
DDX60Q8IY21 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC27.51■■□□□ 1.99
DDX60Q8IY21 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC27.51■■□□□ 1.99
DDX60Q8IY21 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC27.51■■□□□ 1.99
DDX60Q8IY21 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
DDX60Q8IY21 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC27.5■■□□□ 1.99
DDX60Q8IY21 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC27.5■■□□□ 1.99
DDX60Q8IY21 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
DDX60Q8IY21 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC27.5■■□□□ 1.99
DDX60Q8IY21 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC27.5■■□□□ 1.99
DDX60Q8IY21 VPS53-216ENST00000574029 585 ntTSL 4 BASIC27.5■■□□□ 1.99
DDX60Q8IY21 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC27.5■■□□□ 1.99
DDX60Q8IY21 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
DDX60Q8IY21 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC27.5■■□□□ 1.99
DDX60Q8IY21 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC27.5■■□□□ 1.99
DDX60Q8IY21 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC27.5■■□□□ 1.99
DDX60Q8IY21 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC27.5■■□□□ 1.99
DDX60Q8IY21 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
DDX60Q8IY21 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
DDX60Q8IY21 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC27.5■■□□□ 1.99
DDX60Q8IY21 DLX3-202ENST00000512495 834 ntTSL 2 BASIC27.5■■□□□ 1.99
DDX60Q8IY21 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC27.5■■□□□ 1.99
DDX60Q8IY21 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
DDX60Q8IY21 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
DDX60Q8IY21 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
DDX60Q8IY21 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
DDX60Q8IY21 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
DDX60Q8IY21 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
DDX60Q8IY21 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms