Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RP1L1Q8IWN7 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RP1L1Q8IWN7 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20■□□□□ 0.79
RP1L1Q8IWN7 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20■□□□□ 0.79
RP1L1Q8IWN7 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC20■□□□□ 0.79
RP1L1Q8IWN7 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
RP1L1Q8IWN7 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
RP1L1Q8IWN7 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RP1L1Q8IWN7 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RP1L1Q8IWN7 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RP1L1Q8IWN7 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RP1L1Q8IWN7 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
RP1L1Q8IWN7 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RP1L1Q8IWN7 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.99■□□□□ 0.79
RP1L1Q8IWN7 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC19.99■□□□□ 0.79
RP1L1Q8IWN7 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC19.99■□□□□ 0.79
RP1L1Q8IWN7 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RP1L1Q8IWN7 AL109923.1-201ENST00000618799 583 ntBASIC19.99■□□□□ 0.79
RP1L1Q8IWN7 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RP1L1Q8IWN7 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
RP1L1Q8IWN7 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
RP1L1Q8IWN7 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
RP1L1Q8IWN7 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
RP1L1Q8IWN7 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RP1L1Q8IWN7 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
RP1L1Q8IWN7 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.98■□□□□ 0.79
RP1L1Q8IWN7 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.98■□□□□ 0.79
RP1L1Q8IWN7 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RP1L1Q8IWN7 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
RP1L1Q8IWN7 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
RP1L1Q8IWN7 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
RP1L1Q8IWN7 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RP1L1Q8IWN7 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RP1L1Q8IWN7 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RP1L1Q8IWN7 AC073210.2-201ENST00000430369 194 ntBASIC19.98■□□□□ 0.79
RP1L1Q8IWN7 CD99P1-205ENST00000527459 561 ntBASIC19.98■□□□□ 0.79
RP1L1Q8IWN7 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.98■□□□□ 0.79
RP1L1Q8IWN7 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RP1L1Q8IWN7 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
RP1L1Q8IWN7 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
RP1L1Q8IWN7 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RP1L1Q8IWN7 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RP1L1Q8IWN7 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.97■□□□□ 0.79
RP1L1Q8IWN7 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
RP1L1Q8IWN7 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC19.97■□□□□ 0.79
RP1L1Q8IWN7 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RP1L1Q8IWN7 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC19.97■□□□□ 0.79
RP1L1Q8IWN7 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19.97■□□□□ 0.79
RP1L1Q8IWN7 MAP2K4P1-201ENST00000438453 1195 ntBASIC19.97■□□□□ 0.79
RP1L1Q8IWN7 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RP1L1Q8IWN7 RARA-203ENST00000394086 2008 ntTSL 2 BASIC19.96■□□□□ 0.79
RP1L1Q8IWN7 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RP1L1Q8IWN7 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RP1L1Q8IWN7 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
RP1L1Q8IWN7 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
RP1L1Q8IWN7 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC19.96■□□□□ 0.79
RP1L1Q8IWN7 MFSD11-216ENST00000590393 1141 ntBASIC19.96■□□□□ 0.79
RP1L1Q8IWN7 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RP1L1Q8IWN7 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.96■□□□□ 0.79
RP1L1Q8IWN7 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.96■□□□□ 0.79
RP1L1Q8IWN7 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.96■□□□□ 0.79
RP1L1Q8IWN7 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RP1L1Q8IWN7 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
RP1L1Q8IWN7 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
RP1L1Q8IWN7 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RP1L1Q8IWN7 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RP1L1Q8IWN7 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
RP1L1Q8IWN7 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.95■□□□□ 0.78
RP1L1Q8IWN7 GAMT-205ENST00000640762 751 ntTSL 5 BASIC19.95■□□□□ 0.78
RP1L1Q8IWN7 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RP1L1Q8IWN7 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RP1L1Q8IWN7 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC19.95■□□□□ 0.78
RP1L1Q8IWN7 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RP1L1Q8IWN7 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
RP1L1Q8IWN7 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.95■□□□□ 0.78
RP1L1Q8IWN7 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.95■□□□□ 0.78
RP1L1Q8IWN7 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
RP1L1Q8IWN7 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.95■□□□□ 0.78
RP1L1Q8IWN7 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RP1L1Q8IWN7 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
RP1L1Q8IWN7 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
RP1L1Q8IWN7 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RP1L1Q8IWN7 FP325331.1-202ENST00000623531 1380 ntBASIC19.94■□□□□ 0.78
RP1L1Q8IWN7 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RP1L1Q8IWN7 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RP1L1Q8IWN7 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.94■□□□□ 0.78
RP1L1Q8IWN7 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RP1L1Q8IWN7 SHD-204ENST00000599689 1729 ntTSL 5 BASIC19.94■□□□□ 0.78
RP1L1Q8IWN7 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RP1L1Q8IWN7 BX005040.4-201ENST00000637145 1518 ntBASIC19.94■□□□□ 0.78
RP1L1Q8IWN7 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.94■□□□□ 0.78
RP1L1Q8IWN7 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RP1L1Q8IWN7 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.94■□□□□ 0.78
RP1L1Q8IWN7 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC19.94■□□□□ 0.78
RP1L1Q8IWN7 AC008687.6-201ENST00000596318 630 ntBASIC19.94■□□□□ 0.78
RP1L1Q8IWN7 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RP1L1Q8IWN7 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.93■□□□□ 0.78
RP1L1Q8IWN7 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RP1L1Q8IWN7 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RP1L1Q8IWN7 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms