Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.64■□□□□ 0.89
CCDC71Q8IV32 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.64■□□□□ 0.89
CCDC71Q8IV32 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC71Q8IV32 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.64■□□□□ 0.89
CCDC71Q8IV32 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.64■□□□□ 0.89
CCDC71Q8IV32 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC71Q8IV32 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC71Q8IV32 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC71Q8IV32 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC71Q8IV32 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
CCDC71Q8IV32 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC71Q8IV32 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.63■□□□□ 0.89
CCDC71Q8IV32 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC71Q8IV32 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.63■□□□□ 0.89
CCDC71Q8IV32 PBX2P1-201ENST00000493219 1291 ntBASIC20.63■□□□□ 0.89
CCDC71Q8IV32 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.63■□□□□ 0.89
CCDC71Q8IV32 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.63■□□□□ 0.89
CCDC71Q8IV32 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.63■□□□□ 0.89
CCDC71Q8IV32 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC71Q8IV32 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC71Q8IV32 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC71Q8IV32 AC242852.2-201ENST00000615738 1807 ntBASIC20.62■□□□□ 0.89
CCDC71Q8IV32 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC71Q8IV32 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC71Q8IV32 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC71Q8IV32 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC71Q8IV32 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.62■□□□□ 0.89
CCDC71Q8IV32 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.62■□□□□ 0.89
CCDC71Q8IV32 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.62■□□□□ 0.89
CCDC71Q8IV32 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC71Q8IV32 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC71Q8IV32 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.62■□□□□ 0.89
CCDC71Q8IV32 AL137060.1-201ENST00000618151 2648 ntBASIC20.62■□□□□ 0.89
CCDC71Q8IV32 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CCDC71Q8IV32 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CCDC71Q8IV32 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC71Q8IV32 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC71Q8IV32 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
CCDC71Q8IV32 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.61■□□□□ 0.89
CCDC71Q8IV32 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC71Q8IV32 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC71Q8IV32 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.61■□□□□ 0.89
CCDC71Q8IV32 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC71Q8IV32 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC71Q8IV32 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CCDC71Q8IV32 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC71Q8IV32 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC71Q8IV32 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC71Q8IV32 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC71Q8IV32 AC133561.4-201ENST00000566112 224 ntBASIC20.6■□□□□ 0.89
CCDC71Q8IV32 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC71Q8IV32 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.6■□□□□ 0.89
CCDC71Q8IV32 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CCDC71Q8IV32 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
CCDC71Q8IV32 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC71Q8IV32 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.59■□□□□ 0.89
CCDC71Q8IV32 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC71Q8IV32 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.59■□□□□ 0.89
CCDC71Q8IV32 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.59■□□□□ 0.89
CCDC71Q8IV32 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.59■□□□□ 0.89
CCDC71Q8IV32 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.59■□□□□ 0.89
CCDC71Q8IV32 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.59■□□□□ 0.89
CCDC71Q8IV32 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC71Q8IV32 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC71Q8IV32 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.58■□□□□ 0.89
CCDC71Q8IV32 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC71Q8IV32 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC71Q8IV32 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC71Q8IV32 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.58■□□□□ 0.89
CCDC71Q8IV32 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC71Q8IV32 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
CCDC71Q8IV32 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
CCDC71Q8IV32 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC71Q8IV32 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CCDC71Q8IV32 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CCDC71Q8IV32 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CCDC71Q8IV32 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
CCDC71Q8IV32 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.57■□□□□ 0.88
CCDC71Q8IV32 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC71Q8IV32 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.57■□□□□ 0.88
CCDC71Q8IV32 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC71Q8IV32 UNC93B3-201ENST00000308076 687 ntBASIC20.57■□□□□ 0.88
CCDC71Q8IV32 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC71Q8IV32 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC71Q8IV32 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC71Q8IV32 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
CCDC71Q8IV32 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
CCDC71Q8IV32 AC106739.1-201ENST00000617035 715 ntBASIC20.57■□□□□ 0.88
CCDC71Q8IV32 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC71Q8IV32 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC71Q8IV32 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC71Q8IV32 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.56■□□□□ 0.88
CCDC71Q8IV32 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
CCDC71Q8IV32 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC71Q8IV32 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC71Q8IV32 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.56■□□□□ 0.88
CCDC71Q8IV32 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.56■□□□□ 0.88
CCDC71Q8IV32 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC71Q8IV32 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.56■□□□□ 0.88
CCDC71Q8IV32 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms