Protein–RNA interactions for Protein: Q86Y39

NDUFA11, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11, humanhuman

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA11Q86Y39 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NDUFA11Q86Y39 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NDUFA11Q86Y39 STX4-202ENST00000394998 1498 ntTSL 2 BASIC17.12■□□□□ 0.33
NDUFA11Q86Y39 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NDUFA11Q86Y39 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NDUFA11Q86Y39 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC17.12■□□□□ 0.33
NDUFA11Q86Y39 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
NDUFA11Q86Y39 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NDUFA11Q86Y39 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
NDUFA11Q86Y39 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
NDUFA11Q86Y39 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
NDUFA11Q86Y39 NT5C3AP1-201ENST00000394500 1012 ntBASIC17.12■□□□□ 0.33
NDUFA11Q86Y39 MFF-208ENST00000409616 1247 ntTSL 5 BASIC17.12■□□□□ 0.33
NDUFA11Q86Y39 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC17.12■□□□□ 0.33
NDUFA11Q86Y39 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC17.12■□□□□ 0.33
NDUFA11Q86Y39 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NDUFA11Q86Y39 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
NDUFA11Q86Y39 TERF1P2-201ENST00000583350 1212 ntBASIC17.12■□□□□ 0.33
NDUFA11Q86Y39 NTF6G-201ENST00000591094 616 ntBASIC17.12■□□□□ 0.33
NDUFA11Q86Y39 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NDUFA11Q86Y39 MED17-227ENST00000640521 2047 ntTSL 5 BASIC17.12■□□□□ 0.33
NDUFA11Q86Y39 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC17.12■□□□□ 0.33
NDUFA11Q86Y39 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NDUFA11Q86Y39 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NDUFA11Q86Y39 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NDUFA11Q86Y39 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NDUFA11Q86Y39 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NDUFA11Q86Y39 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC17.11■□□□□ 0.33
NDUFA11Q86Y39 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC17.11■□□□□ 0.33
NDUFA11Q86Y39 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC17.11■□□□□ 0.33
NDUFA11Q86Y39 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC17.11■□□□□ 0.33
NDUFA11Q86Y39 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NDUFA11Q86Y39 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NDUFA11Q86Y39 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NDUFA11Q86Y39 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC17.11■□□□□ 0.33
NDUFA11Q86Y39 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NDUFA11Q86Y39 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NDUFA11Q86Y39 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NDUFA11Q86Y39 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC17.11■□□□□ 0.33
NDUFA11Q86Y39 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
NDUFA11Q86Y39 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
NDUFA11Q86Y39 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NDUFA11Q86Y39 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
NDUFA11Q86Y39 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NDUFA11Q86Y39 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
NDUFA11Q86Y39 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
NDUFA11Q86Y39 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NDUFA11Q86Y39 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC17.1■□□□□ 0.33
NDUFA11Q86Y39 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC17.1■□□□□ 0.33
NDUFA11Q86Y39 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC17.1■□□□□ 0.33
NDUFA11Q86Y39 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NDUFA11Q86Y39 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
NDUFA11Q86Y39 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
NDUFA11Q86Y39 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC17.1■□□□□ 0.33
NDUFA11Q86Y39 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
NDUFA11Q86Y39 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC17.1■□□□□ 0.33
NDUFA11Q86Y39 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NDUFA11Q86Y39 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
NDUFA11Q86Y39 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
NDUFA11Q86Y39 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NDUFA11Q86Y39 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NDUFA11Q86Y39 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NDUFA11Q86Y39 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC17.09■□□□□ 0.33
NDUFA11Q86Y39 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC17.09■□□□□ 0.33
NDUFA11Q86Y39 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC17.09■□□□□ 0.33
NDUFA11Q86Y39 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC17.09■□□□□ 0.33
NDUFA11Q86Y39 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NDUFA11Q86Y39 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NDUFA11Q86Y39 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NDUFA11Q86Y39 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
NDUFA11Q86Y39 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NDUFA11Q86Y39 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC17.09■□□□□ 0.33
NDUFA11Q86Y39 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC17.09■□□□□ 0.33
NDUFA11Q86Y39 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC17.09■□□□□ 0.33
NDUFA11Q86Y39 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
NDUFA11Q86Y39 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
NDUFA11Q86Y39 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
NDUFA11Q86Y39 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
NDUFA11Q86Y39 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
NDUFA11Q86Y39 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
NDUFA11Q86Y39 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
NDUFA11Q86Y39 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC17.08■□□□□ 0.32
NDUFA11Q86Y39 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
NDUFA11Q86Y39 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NDUFA11Q86Y39 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NDUFA11Q86Y39 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NDUFA11Q86Y39 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NDUFA11Q86Y39 AC092437.1-201ENST00000624794 1048 ntBASIC17.08■□□□□ 0.32
NDUFA11Q86Y39 AC068587.7-201ENST00000641602 218 ntBASIC17.08■□□□□ 0.32
NDUFA11Q86Y39 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NDUFA11Q86Y39 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NDUFA11Q86Y39 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NDUFA11Q86Y39 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NDUFA11Q86Y39 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
NDUFA11Q86Y39 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NDUFA11Q86Y39 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
NDUFA11Q86Y39 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NDUFA11Q86Y39 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NDUFA11Q86Y39 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
NDUFA11Q86Y39 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms