Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
VPS13BQ7Z7G8 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
VPS13BQ7Z7G8 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
VPS13BQ7Z7G8 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
VPS13BQ7Z7G8 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VPS13BQ7Z7G8 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
VPS13BQ7Z7G8 AC009086.3-201ENST00000623486 1008 ntBASIC13.79□□□□□ -0.2
VPS13BQ7Z7G8 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
VPS13BQ7Z7G8 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
VPS13BQ7Z7G8 ALDH1A3-203ENST00000557963 1670 ntBASIC13.79□□□□□ -0.2
VPS13BQ7Z7G8 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VPS13BQ7Z7G8 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
VPS13BQ7Z7G8 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
VPS13BQ7Z7G8 AC006970.2-201ENST00000450065 779 ntBASIC13.79□□□□□ -0.2
VPS13BQ7Z7G8 AC011767.1-201ENST00000617410 1153 ntBASIC13.79□□□□□ -0.2
VPS13BQ7Z7G8 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC13.79□□□□□ -0.2
VPS13BQ7Z7G8 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VPS13BQ7Z7G8 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
VPS13BQ7Z7G8 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
VPS13BQ7Z7G8 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VPS13BQ7Z7G8 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
VPS13BQ7Z7G8 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VPS13BQ7Z7G8 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VPS13BQ7Z7G8 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VPS13BQ7Z7G8 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC13.78□□□□□ -0.2
VPS13BQ7Z7G8 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VPS13BQ7Z7G8 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
VPS13BQ7Z7G8 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VPS13BQ7Z7G8 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
VPS13BQ7Z7G8 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
VPS13BQ7Z7G8 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VPS13BQ7Z7G8 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC13.78□□□□□ -0.2
VPS13BQ7Z7G8 AC144652.1-201ENST00000609974 1624 ntBASIC13.78□□□□□ -0.2
VPS13BQ7Z7G8 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VPS13BQ7Z7G8 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VPS13BQ7Z7G8 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
VPS13BQ7Z7G8 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC13.78□□□□□ -0.2
VPS13BQ7Z7G8 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
VPS13BQ7Z7G8 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
VPS13BQ7Z7G8 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
VPS13BQ7Z7G8 AC093827.2-201ENST00000512654 315 ntBASIC13.77□□□□□ -0.2
VPS13BQ7Z7G8 KLF13-207ENST00000560473 489 ntTSL 3 BASIC13.77□□□□□ -0.2
VPS13BQ7Z7G8 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC13.77□□□□□ -0.2
VPS13BQ7Z7G8 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
VPS13BQ7Z7G8 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
VPS13BQ7Z7G8 GPX1P1-201ENST00000388829 606 ntBASIC13.77□□□□□ -0.21
VPS13BQ7Z7G8 OR2I1P-207ENST00000453522 948 ntBASIC13.77□□□□□ -0.21
VPS13BQ7Z7G8 AC010525.1-201ENST00000585559 441 ntBASIC13.77□□□□□ -0.21
VPS13BQ7Z7G8 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC13.77□□□□□ -0.21
VPS13BQ7Z7G8 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC13.77□□□□□ -0.21
VPS13BQ7Z7G8 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
VPS13BQ7Z7G8 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
VPS13BQ7Z7G8 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC13.77□□□□□ -0.21
VPS13BQ7Z7G8 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC13.77□□□□□ -0.21
VPS13BQ7Z7G8 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
VPS13BQ7Z7G8 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
VPS13BQ7Z7G8 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC13.77□□□□□ -0.21
VPS13BQ7Z7G8 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
VPS13BQ7Z7G8 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
VPS13BQ7Z7G8 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
VPS13BQ7Z7G8 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
VPS13BQ7Z7G8 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
VPS13BQ7Z7G8 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
VPS13BQ7Z7G8 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
VPS13BQ7Z7G8 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
VPS13BQ7Z7G8 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC13.76□□□□□ -0.21
VPS13BQ7Z7G8 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
VPS13BQ7Z7G8 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
VPS13BQ7Z7G8 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
VPS13BQ7Z7G8 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
VPS13BQ7Z7G8 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
VPS13BQ7Z7G8 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
VPS13BQ7Z7G8 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
VPS13BQ7Z7G8 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
VPS13BQ7Z7G8 APTR-205ENST00000447009 902 ntTSL 2 BASIC13.76□□□□□ -0.21
VPS13BQ7Z7G8 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC13.76□□□□□ -0.21
VPS13BQ7Z7G8 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC13.76□□□□□ -0.21
VPS13BQ7Z7G8 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
VPS13BQ7Z7G8 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC13.76□□□□□ -0.21
VPS13BQ7Z7G8 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC13.76□□□□□ -0.21
VPS13BQ7Z7G8 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC13.76□□□□□ -0.21
VPS13BQ7Z7G8 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
VPS13BQ7Z7G8 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC13.76□□□□□ -0.21
VPS13BQ7Z7G8 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
VPS13BQ7Z7G8 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
VPS13BQ7Z7G8 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC13.75□□□□□ -0.21
VPS13BQ7Z7G8 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
VPS13BQ7Z7G8 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC13.75□□□□□ -0.21
VPS13BQ7Z7G8 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
VPS13BQ7Z7G8 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
VPS13BQ7Z7G8 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
VPS13BQ7Z7G8 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
VPS13BQ7Z7G8 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
VPS13BQ7Z7G8 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
VPS13BQ7Z7G8 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
VPS13BQ7Z7G8 AC141586.4-201ENST00000624558 1573 ntBASIC13.75□□□□□ -0.21
VPS13BQ7Z7G8 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
VPS13BQ7Z7G8 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC13.75□□□□□ -0.21
VPS13BQ7Z7G8 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC13.75□□□□□ -0.21
VPS13BQ7Z7G8 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms