Protein–RNA interactions for Protein: Q6ZMV5

PPP4R3CP, Putative SMEK homolog 3, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3CPQ6ZMV5 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
PPP4R3CPQ6ZMV5 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC24.91■■□□□ 1.58
PPP4R3CPQ6ZMV5 AC009102.2-201ENST00000606772 1639 ntBASIC24.91■■□□□ 1.58
PPP4R3CPQ6ZMV5 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC24.91■■□□□ 1.58
PPP4R3CPQ6ZMV5 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
PPP4R3CPQ6ZMV5 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC24.91■■□□□ 1.58
PPP4R3CPQ6ZMV5 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
PPP4R3CPQ6ZMV5 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
PPP4R3CPQ6ZMV5 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC24.91■■□□□ 1.58
PPP4R3CPQ6ZMV5 SETP12-201ENST00000514068 805 ntBASIC24.91■■□□□ 1.58
PPP4R3CPQ6ZMV5 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC24.91■■□□□ 1.58
PPP4R3CPQ6ZMV5 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC24.91■■□□□ 1.58
PPP4R3CPQ6ZMV5 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC24.91■■□□□ 1.58
PPP4R3CPQ6ZMV5 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC24.9■■□□□ 1.58
PPP4R3CPQ6ZMV5 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
PPP4R3CPQ6ZMV5 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC24.9■■□□□ 1.58
PPP4R3CPQ6ZMV5 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
PPP4R3CPQ6ZMV5 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC24.9■■□□□ 1.58
PPP4R3CPQ6ZMV5 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC24.9■■□□□ 1.58
PPP4R3CPQ6ZMV5 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC24.9■■□□□ 1.58
PPP4R3CPQ6ZMV5 AL117351.1-201ENST00000438864 766 ntBASIC24.9■■□□□ 1.58
PPP4R3CPQ6ZMV5 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC24.9■■□□□ 1.58
PPP4R3CPQ6ZMV5 AL139246.5-201ENST00000606645 996 ntBASIC24.9■■□□□ 1.58
PPP4R3CPQ6ZMV5 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
PPP4R3CPQ6ZMV5 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC24.9■■□□□ 1.58
PPP4R3CPQ6ZMV5 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC24.9■■□□□ 1.58
PPP4R3CPQ6ZMV5 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.58
PPP4R3CPQ6ZMV5 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
PPP4R3CPQ6ZMV5 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC24.89■■□□□ 1.58
PPP4R3CPQ6ZMV5 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC24.89■■□□□ 1.58
PPP4R3CPQ6ZMV5 AL392088.1-201ENST00000428364 670 ntBASIC24.89■■□□□ 1.58
PPP4R3CPQ6ZMV5 NALT1-201ENST00000429224 738 ntTSL 5 BASIC24.89■■□□□ 1.58
PPP4R3CPQ6ZMV5 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC24.89■■□□□ 1.58
PPP4R3CPQ6ZMV5 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC24.89■■□□□ 1.58
PPP4R3CPQ6ZMV5 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC24.89■■□□□ 1.57
PPP4R3CPQ6ZMV5 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
PPP4R3CPQ6ZMV5 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC24.89■■□□□ 1.57
PPP4R3CPQ6ZMV5 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
PPP4R3CPQ6ZMV5 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC24.89■■□□□ 1.57
PPP4R3CPQ6ZMV5 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC24.89■■□□□ 1.57
PPP4R3CPQ6ZMV5 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
PPP4R3CPQ6ZMV5 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
PPP4R3CPQ6ZMV5 LTK-203ENST00000453182 2412 ntTSL 2 BASIC24.88■■□□□ 1.57
PPP4R3CPQ6ZMV5 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
PPP4R3CPQ6ZMV5 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC24.88■■□□□ 1.57
PPP4R3CPQ6ZMV5 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
PPP4R3CPQ6ZMV5 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
PPP4R3CPQ6ZMV5 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
PPP4R3CPQ6ZMV5 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC24.88■■□□□ 1.57
PPP4R3CPQ6ZMV5 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
PPP4R3CPQ6ZMV5 USF2-207ENST00000595068 1612 ntTSL 5 BASIC24.88■■□□□ 1.57
PPP4R3CPQ6ZMV5 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
PPP4R3CPQ6ZMV5 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC24.88■■□□□ 1.57
PPP4R3CPQ6ZMV5 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC24.88■■□□□ 1.57
PPP4R3CPQ6ZMV5 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC24.88■■□□□ 1.57
PPP4R3CPQ6ZMV5 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
PPP4R3CPQ6ZMV5 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC24.88■■□□□ 1.57
PPP4R3CPQ6ZMV5 AC110285.6-201ENST00000617652 491 ntBASIC24.88■■□□□ 1.57
PPP4R3CPQ6ZMV5 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
PPP4R3CPQ6ZMV5 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
PPP4R3CPQ6ZMV5 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC24.88■■□□□ 1.57
PPP4R3CPQ6ZMV5 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
PPP4R3CPQ6ZMV5 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
PPP4R3CPQ6ZMV5 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC24.87■■□□□ 1.57
PPP4R3CPQ6ZMV5 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
PPP4R3CPQ6ZMV5 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC24.87■■□□□ 1.57
PPP4R3CPQ6ZMV5 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC24.87■■□□□ 1.57
PPP4R3CPQ6ZMV5 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
PPP4R3CPQ6ZMV5 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
PPP4R3CPQ6ZMV5 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC24.86■■□□□ 1.57
PPP4R3CPQ6ZMV5 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
PPP4R3CPQ6ZMV5 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC24.86■■□□□ 1.57
PPP4R3CPQ6ZMV5 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
PPP4R3CPQ6ZMV5 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
PPP4R3CPQ6ZMV5 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC24.86■■□□□ 1.57
PPP4R3CPQ6ZMV5 AC096631.2-201ENST00000436136 790 ntBASIC24.86■■□□□ 1.57
PPP4R3CPQ6ZMV5 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC24.86■■□□□ 1.57
PPP4R3CPQ6ZMV5 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
PPP4R3CPQ6ZMV5 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC24.86■■□□□ 1.57
PPP4R3CPQ6ZMV5 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
PPP4R3CPQ6ZMV5 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC24.86■■□□□ 1.57
PPP4R3CPQ6ZMV5 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
PPP4R3CPQ6ZMV5 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.57
PPP4R3CPQ6ZMV5 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
PPP4R3CPQ6ZMV5 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
PPP4R3CPQ6ZMV5 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC24.85■■□□□ 1.57
PPP4R3CPQ6ZMV5 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
PPP4R3CPQ6ZMV5 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC24.85■■□□□ 1.57
PPP4R3CPQ6ZMV5 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC24.85■■□□□ 1.57
PPP4R3CPQ6ZMV5 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
PPP4R3CPQ6ZMV5 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC24.85■■□□□ 1.57
PPP4R3CPQ6ZMV5 AC135178.5-201ENST00000602597 674 ntBASIC24.85■■□□□ 1.57
PPP4R3CPQ6ZMV5 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC24.85■■□□□ 1.57
PPP4R3CPQ6ZMV5 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
PPP4R3CPQ6ZMV5 C17orf82-201ENST00000623772 1530 ntBASIC24.85■■□□□ 1.57
PPP4R3CPQ6ZMV5 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC24.85■■□□□ 1.57
PPP4R3CPQ6ZMV5 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC24.85■■□□□ 1.57
PPP4R3CPQ6ZMV5 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC24.85■■□□□ 1.57
PPP4R3CPQ6ZMV5 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
PPP4R3CPQ6ZMV5 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms