Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC24.07■■□□□ 1.44
CNKSR3Q6P9H4 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
CNKSR3Q6P9H4 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
CNKSR3Q6P9H4 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CNKSR3Q6P9H4 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CNKSR3Q6P9H4 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CNKSR3Q6P9H4 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC24.06■■□□□ 1.44
CNKSR3Q6P9H4 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC24.06■■□□□ 1.44
CNKSR3Q6P9H4 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC24.06■■□□□ 1.44
CNKSR3Q6P9H4 AC068587.7-201ENST00000641602 218 ntBASIC24.06■■□□□ 1.44
CNKSR3Q6P9H4 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC24.06■■□□□ 1.44
CNKSR3Q6P9H4 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC24.05■■□□□ 1.44
CNKSR3Q6P9H4 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC24.05■■□□□ 1.44
CNKSR3Q6P9H4 MAP2K4P1-201ENST00000438453 1195 ntBASIC24.05■■□□□ 1.44
CNKSR3Q6P9H4 AC006970.2-201ENST00000450065 779 ntBASIC24.05■■□□□ 1.44
CNKSR3Q6P9H4 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC24.05■■□□□ 1.44
CNKSR3Q6P9H4 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC24.05■■□□□ 1.44
CNKSR3Q6P9H4 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
CNKSR3Q6P9H4 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC24.04■■□□□ 1.44
CNKSR3Q6P9H4 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
CNKSR3Q6P9H4 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC24.04■■□□□ 1.44
CNKSR3Q6P9H4 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
CNKSR3Q6P9H4 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC24.04■■□□□ 1.44
CNKSR3Q6P9H4 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CNKSR3Q6P9H4 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CNKSR3Q6P9H4 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CNKSR3Q6P9H4 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
CNKSR3Q6P9H4 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
CNKSR3Q6P9H4 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CNKSR3Q6P9H4 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CNKSR3Q6P9H4 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC24.03■■□□□ 1.44
CNKSR3Q6P9H4 METTL26-203ENST00000397664 604 ntTSL 2 BASIC24.03■■□□□ 1.44
CNKSR3Q6P9H4 CROCCP5-201ENST00000436658 830 ntBASIC24.03■■□□□ 1.44
CNKSR3Q6P9H4 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC24.03■■□□□ 1.44
CNKSR3Q6P9H4 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC24.03■■□□□ 1.44
CNKSR3Q6P9H4 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
CNKSR3Q6P9H4 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CNKSR3Q6P9H4 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC24.02■■□□□ 1.44
CNKSR3Q6P9H4 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC24.02■■□□□ 1.44
CNKSR3Q6P9H4 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC24.02■■□□□ 1.44
CNKSR3Q6P9H4 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC24.02■■□□□ 1.44
CNKSR3Q6P9H4 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC24.02■■□□□ 1.44
CNKSR3Q6P9H4 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC24.02■■□□□ 1.44
CNKSR3Q6P9H4 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
CNKSR3Q6P9H4 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CNKSR3Q6P9H4 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CNKSR3Q6P9H4 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CNKSR3Q6P9H4 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC24.01■■□□□ 1.43
CNKSR3Q6P9H4 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC24.01■■□□□ 1.43
CNKSR3Q6P9H4 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CNKSR3Q6P9H4 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC24.01■■□□□ 1.43
CNKSR3Q6P9H4 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC24.01■■□□□ 1.43
CNKSR3Q6P9H4 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
CNKSR3Q6P9H4 AL109923.1-201ENST00000618799 583 ntBASIC24.01■■□□□ 1.43
CNKSR3Q6P9H4 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC24.01■■□□□ 1.43
CNKSR3Q6P9H4 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CNKSR3Q6P9H4 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
CNKSR3Q6P9H4 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CNKSR3Q6P9H4 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CNKSR3Q6P9H4 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CNKSR3Q6P9H4 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC24■■□□□ 1.43
CNKSR3Q6P9H4 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
CNKSR3Q6P9H4 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
CNKSR3Q6P9H4 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
CNKSR3Q6P9H4 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CNKSR3Q6P9H4 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC24■■□□□ 1.43
CNKSR3Q6P9H4 KRT18P11-201ENST00000435214 1283 ntBASIC24■■□□□ 1.43
CNKSR3Q6P9H4 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC24■■□□□ 1.43
CNKSR3Q6P9H4 AC087239.1-201ENST00000622671 572 ntBASIC24■■□□□ 1.43
CNKSR3Q6P9H4 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CNKSR3Q6P9H4 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC24■■□□□ 1.43
CNKSR3Q6P9H4 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC24■■□□□ 1.43
CNKSR3Q6P9H4 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC24■■□□□ 1.43
CNKSR3Q6P9H4 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC24■■□□□ 1.43
CNKSR3Q6P9H4 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC24■■□□□ 1.43
CNKSR3Q6P9H4 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC24■■□□□ 1.43
CNKSR3Q6P9H4 EI24-211ENST00000534546 1544 ntTSL 2 BASIC24■■□□□ 1.43
CNKSR3Q6P9H4 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CNKSR3Q6P9H4 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CNKSR3Q6P9H4 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CNKSR3Q6P9H4 AL355802.2-201ENST00000402069 882 ntBASIC23.99■■□□□ 1.43
CNKSR3Q6P9H4 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CNKSR3Q6P9H4 SMUG1P1-201ENST00000590640 811 ntBASIC23.99■■□□□ 1.43
CNKSR3Q6P9H4 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC23.99■■□□□ 1.43
CNKSR3Q6P9H4 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CNKSR3Q6P9H4 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CNKSR3Q6P9H4 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC23.98■■□□□ 1.43
CNKSR3Q6P9H4 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CNKSR3Q6P9H4 NCF1B-203ENST00000435988 1254 ntBASIC23.98■■□□□ 1.43
CNKSR3Q6P9H4 AC010141.3-201ENST00000456659 717 ntBASIC23.98■■□□□ 1.43
CNKSR3Q6P9H4 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC23.98■■□□□ 1.43
CNKSR3Q6P9H4 TESC-206ENST00000541210 936 ntTSL 3 BASIC23.98■■□□□ 1.43
CNKSR3Q6P9H4 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC23.98■■□□□ 1.43
CNKSR3Q6P9H4 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CNKSR3Q6P9H4 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
CNKSR3Q6P9H4 AC004687.1-201ENST00000579003 1625 ntBASIC23.98■■□□□ 1.43
CNKSR3Q6P9H4 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC23.98■■□□□ 1.43
CNKSR3Q6P9H4 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CNKSR3Q6P9H4 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CNKSR3Q6P9H4 ABHD17AP1-201ENST00000358206 933 ntBASIC23.97■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms