Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NIPAL3Q6P499 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NIPAL3Q6P499 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NIPAL3Q6P499 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NIPAL3Q6P499 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NIPAL3Q6P499 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
NIPAL3Q6P499 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.05■□□□□ 0.8
NIPAL3Q6P499 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NIPAL3Q6P499 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NIPAL3Q6P499 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NIPAL3Q6P499 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NIPAL3Q6P499 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
NIPAL3Q6P499 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.04■□□□□ 0.8
NIPAL3Q6P499 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NIPAL3Q6P499 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NIPAL3Q6P499 AL356740.2-201ENST00000601559 647 ntBASIC20.04■□□□□ 0.8
NIPAL3Q6P499 AL117332.1-201ENST00000622628 974 ntBASIC20.04■□□□□ 0.8
NIPAL3Q6P499 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NIPAL3Q6P499 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.03■□□□□ 0.8
NIPAL3Q6P499 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
NIPAL3Q6P499 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
NIPAL3Q6P499 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NIPAL3Q6P499 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NIPAL3Q6P499 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
NIPAL3Q6P499 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.03■□□□□ 0.8
NIPAL3Q6P499 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.03■□□□□ 0.8
NIPAL3Q6P499 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
NIPAL3Q6P499 AL353803.4-201ENST00000565882 1934 ntBASIC20.03■□□□□ 0.8
NIPAL3Q6P499 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NIPAL3Q6P499 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NIPAL3Q6P499 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NIPAL3Q6P499 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
NIPAL3Q6P499 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
NIPAL3Q6P499 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NIPAL3Q6P499 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NIPAL3Q6P499 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
NIPAL3Q6P499 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
NIPAL3Q6P499 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.02■□□□□ 0.79
NIPAL3Q6P499 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.02■□□□□ 0.79
NIPAL3Q6P499 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
NIPAL3Q6P499 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NIPAL3Q6P499 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.01■□□□□ 0.79
NIPAL3Q6P499 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
NIPAL3Q6P499 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NIPAL3Q6P499 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NIPAL3Q6P499 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NIPAL3Q6P499 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NIPAL3Q6P499 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.01■□□□□ 0.79
NIPAL3Q6P499 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
NIPAL3Q6P499 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NIPAL3Q6P499 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NIPAL3Q6P499 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NIPAL3Q6P499 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NIPAL3Q6P499 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20■□□□□ 0.79
NIPAL3Q6P499 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20■□□□□ 0.79
NIPAL3Q6P499 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NIPAL3Q6P499 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20■□□□□ 0.79
NIPAL3Q6P499 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20■□□□□ 0.79
NIPAL3Q6P499 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20■□□□□ 0.79
NIPAL3Q6P499 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20■□□□□ 0.79
NIPAL3Q6P499 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20■□□□□ 0.79
NIPAL3Q6P499 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20■□□□□ 0.79
NIPAL3Q6P499 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20■□□□□ 0.79
NIPAL3Q6P499 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20■□□□□ 0.79
NIPAL3Q6P499 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NIPAL3Q6P499 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20■□□□□ 0.79
NIPAL3Q6P499 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
NIPAL3Q6P499 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NIPAL3Q6P499 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.99■□□□□ 0.79
NIPAL3Q6P499 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
NIPAL3Q6P499 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NIPAL3Q6P499 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.99■□□□□ 0.79
NIPAL3Q6P499 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
NIPAL3Q6P499 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NIPAL3Q6P499 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.99■□□□□ 0.79
NIPAL3Q6P499 SRR-208ENST00000576848 588 ntTSL 4 BASIC19.99■□□□□ 0.79
NIPAL3Q6P499 MIR3621-201ENST00000580529 85 ntBASIC19.99■□□□□ 0.79
NIPAL3Q6P499 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.99■□□□□ 0.79
NIPAL3Q6P499 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NIPAL3Q6P499 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NIPAL3Q6P499 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.99■□□□□ 0.79
NIPAL3Q6P499 AC139530.1-201ENST00000575312 1977 ntBASIC19.99■□□□□ 0.79
NIPAL3Q6P499 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.99■□□□□ 0.79
NIPAL3Q6P499 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.99■□□□□ 0.79
NIPAL3Q6P499 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
NIPAL3Q6P499 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
NIPAL3Q6P499 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.98■□□□□ 0.79
NIPAL3Q6P499 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
NIPAL3Q6P499 AC131212.1-201ENST00000613771 668 ntBASIC19.98■□□□□ 0.79
NIPAL3Q6P499 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NIPAL3Q6P499 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
NIPAL3Q6P499 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
NIPAL3Q6P499 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.98■□□□□ 0.79
NIPAL3Q6P499 AC009102.2-201ENST00000606772 1639 ntBASIC19.98■□□□□ 0.79
NIPAL3Q6P499 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NIPAL3Q6P499 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
NIPAL3Q6P499 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NIPAL3Q6P499 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
NIPAL3Q6P499 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.97■□□□□ 0.79
NIPAL3Q6P499 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms