Protein–RNA interactions for Protein: Q5H8C1

FREM1, FRAS1-related extracellular matrix protein 1, humanhuman

Predictions only

Length 2,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1Q5H8C1 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
FREM1Q5H8C1 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
FREM1Q5H8C1 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.49■□□□□ 0.71
FREM1Q5H8C1 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.49■□□□□ 0.71
FREM1Q5H8C1 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.49■□□□□ 0.71
FREM1Q5H8C1 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.49■□□□□ 0.71
FREM1Q5H8C1 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
FREM1Q5H8C1 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
FREM1Q5H8C1 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
FREM1Q5H8C1 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
FREM1Q5H8C1 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
FREM1Q5H8C1 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.49■□□□□ 0.71
FREM1Q5H8C1 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
FREM1Q5H8C1 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.49■□□□□ 0.71
FREM1Q5H8C1 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.49■□□□□ 0.71
FREM1Q5H8C1 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
FREM1Q5H8C1 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC19.48■□□□□ 0.71
FREM1Q5H8C1 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
FREM1Q5H8C1 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
FREM1Q5H8C1 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
FREM1Q5H8C1 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.48■□□□□ 0.71
FREM1Q5H8C1 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.48■□□□□ 0.71
FREM1Q5H8C1 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.48■□□□□ 0.71
FREM1Q5H8C1 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.48■□□□□ 0.71
FREM1Q5H8C1 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
FREM1Q5H8C1 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
FREM1Q5H8C1 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.48■□□□□ 0.71
FREM1Q5H8C1 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
FREM1Q5H8C1 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
FREM1Q5H8C1 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.48■□□□□ 0.71
FREM1Q5H8C1 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.48■□□□□ 0.71
FREM1Q5H8C1 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
FREM1Q5H8C1 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
FREM1Q5H8C1 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
FREM1Q5H8C1 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
FREM1Q5H8C1 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
FREM1Q5H8C1 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
FREM1Q5H8C1 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
FREM1Q5H8C1 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
FREM1Q5H8C1 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
FREM1Q5H8C1 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
FREM1Q5H8C1 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.47■□□□□ 0.71
FREM1Q5H8C1 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
FREM1Q5H8C1 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
FREM1Q5H8C1 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.47■□□□□ 0.71
FREM1Q5H8C1 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
FREM1Q5H8C1 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.46■□□□□ 0.71
FREM1Q5H8C1 OR2I1P-207ENST00000453522 948 ntBASIC19.46■□□□□ 0.71
FREM1Q5H8C1 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.46■□□□□ 0.71
FREM1Q5H8C1 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.46■□□□□ 0.71
FREM1Q5H8C1 LINC01960-201ENST00000563759 1884 ntBASIC19.46■□□□□ 0.71
FREM1Q5H8C1 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
FREM1Q5H8C1 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
FREM1Q5H8C1 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.46■□□□□ 0.71
FREM1Q5H8C1 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.46■□□□□ 0.71
FREM1Q5H8C1 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
FREM1Q5H8C1 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.46■□□□□ 0.71
FREM1Q5H8C1 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
FREM1Q5H8C1 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
FREM1Q5H8C1 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
FREM1Q5H8C1 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
FREM1Q5H8C1 MIR572-201ENST00000384983 95 ntBASIC19.45■□□□□ 0.7
FREM1Q5H8C1 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.45■□□□□ 0.7
FREM1Q5H8C1 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.45■□□□□ 0.7
FREM1Q5H8C1 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
FREM1Q5H8C1 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
FREM1Q5H8C1 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
FREM1Q5H8C1 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.45■□□□□ 0.7
FREM1Q5H8C1 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
FREM1Q5H8C1 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.44■□□□□ 0.7
FREM1Q5H8C1 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
FREM1Q5H8C1 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.44■□□□□ 0.7
FREM1Q5H8C1 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.44■□□□□ 0.7
FREM1Q5H8C1 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
FREM1Q5H8C1 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.44■□□□□ 0.7
FREM1Q5H8C1 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.44■□□□□ 0.7
FREM1Q5H8C1 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.44■□□□□ 0.7
FREM1Q5H8C1 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
FREM1Q5H8C1 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.44■□□□□ 0.7
FREM1Q5H8C1 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
FREM1Q5H8C1 IRS3P-201ENST00000223076 1006 ntBASIC19.44■□□□□ 0.7
FREM1Q5H8C1 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.44■□□□□ 0.7
FREM1Q5H8C1 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
FREM1Q5H8C1 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.44■□□□□ 0.7
FREM1Q5H8C1 AP005435.1-201ENST00000529293 1178 ntBASIC19.44■□□□□ 0.7
FREM1Q5H8C1 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.44■□□□□ 0.7
FREM1Q5H8C1 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.44■□□□□ 0.7
FREM1Q5H8C1 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.44■□□□□ 0.7
FREM1Q5H8C1 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
FREM1Q5H8C1 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
FREM1Q5H8C1 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.44■□□□□ 0.7
FREM1Q5H8C1 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
FREM1Q5H8C1 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
FREM1Q5H8C1 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
FREM1Q5H8C1 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
FREM1Q5H8C1 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
FREM1Q5H8C1 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
FREM1Q5H8C1 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
FREM1Q5H8C1 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
FREM1Q5H8C1 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms