Protein–RNA interactions for Protein: Q504U0

C4orf46, Renal cancer differentiation gene 1 protein, humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf46Q504U0 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
C4orf46Q504U0 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.67■□□□□ 0.58
C4orf46Q504U0 AC093536.1-201ENST00000569153 554 ntBASIC18.67■□□□□ 0.58
C4orf46Q504U0 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
C4orf46Q504U0 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
C4orf46Q504U0 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
C4orf46Q504U0 EI24-204ENST00000527235 1625 ntTSL 5 BASIC18.67■□□□□ 0.58
C4orf46Q504U0 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
C4orf46Q504U0 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
C4orf46Q504U0 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC18.66■□□□□ 0.58
C4orf46Q504U0 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
C4orf46Q504U0 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
C4orf46Q504U0 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
C4orf46Q504U0 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
C4orf46Q504U0 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
C4orf46Q504U0 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
C4orf46Q504U0 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
C4orf46Q504U0 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
C4orf46Q504U0 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
C4orf46Q504U0 ALDH1A3-203ENST00000557963 1670 ntBASIC18.66■□□□□ 0.58
C4orf46Q504U0 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
C4orf46Q504U0 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
C4orf46Q504U0 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
C4orf46Q504U0 RNF166-209ENST00000567844 633 ntTSL 5 BASIC18.65■□□□□ 0.58
C4orf46Q504U0 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC18.65■□□□□ 0.58
C4orf46Q504U0 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
C4orf46Q504U0 AL121603.2-201ENST00000557373 2117 ntBASIC18.65■□□□□ 0.58
C4orf46Q504U0 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
C4orf46Q504U0 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
C4orf46Q504U0 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.64■□□□□ 0.58
C4orf46Q504U0 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
C4orf46Q504U0 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
C4orf46Q504U0 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
C4orf46Q504U0 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
C4orf46Q504U0 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
C4orf46Q504U0 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
C4orf46Q504U0 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC18.64■□□□□ 0.57
C4orf46Q504U0 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
C4orf46Q504U0 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
C4orf46Q504U0 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC18.64■□□□□ 0.57
C4orf46Q504U0 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
C4orf46Q504U0 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
C4orf46Q504U0 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
C4orf46Q504U0 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.64■□□□□ 0.57
C4orf46Q504U0 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
C4orf46Q504U0 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
C4orf46Q504U0 FAM99A-202ENST00000538190 1989 ntBASIC18.64■□□□□ 0.57
C4orf46Q504U0 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
C4orf46Q504U0 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
C4orf46Q504U0 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
C4orf46Q504U0 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
C4orf46Q504U0 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
C4orf46Q504U0 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
C4orf46Q504U0 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
C4orf46Q504U0 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
C4orf46Q504U0 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
C4orf46Q504U0 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
C4orf46Q504U0 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
C4orf46Q504U0 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
C4orf46Q504U0 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
C4orf46Q504U0 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
C4orf46Q504U0 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.63■□□□□ 0.57
C4orf46Q504U0 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.63■□□□□ 0.57
C4orf46Q504U0 AC060814.1-201ENST00000554326 538 ntBASIC18.63■□□□□ 0.57
C4orf46Q504U0 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
C4orf46Q504U0 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
C4orf46Q504U0 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
C4orf46Q504U0 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
C4orf46Q504U0 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
C4orf46Q504U0 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
C4orf46Q504U0 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC18.62■□□□□ 0.57
C4orf46Q504U0 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
C4orf46Q504U0 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
C4orf46Q504U0 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
C4orf46Q504U0 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
C4orf46Q504U0 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
C4orf46Q504U0 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
C4orf46Q504U0 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
C4orf46Q504U0 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC18.62■□□□□ 0.57
C4orf46Q504U0 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
C4orf46Q504U0 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
C4orf46Q504U0 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
C4orf46Q504U0 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
C4orf46Q504U0 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
C4orf46Q504U0 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
C4orf46Q504U0 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
C4orf46Q504U0 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
C4orf46Q504U0 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.62■□□□□ 0.57
C4orf46Q504U0 RNF165-205ENST00000588679 2904 ntBASIC18.61■□□□□ 0.57
C4orf46Q504U0 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
C4orf46Q504U0 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
C4orf46Q504U0 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC18.61■□□□□ 0.57
C4orf46Q504U0 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
C4orf46Q504U0 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
C4orf46Q504U0 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
C4orf46Q504U0 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC18.61■□□□□ 0.57
C4orf46Q504U0 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
C4orf46Q504U0 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
C4orf46Q504U0 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC18.61■□□□□ 0.57
C4orf46Q504U0 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms