Protein–RNA interactions for Protein: Q04781

RKR1, E3 ubiquitin-protein ligase listerin, yeastyeast

Predictions only

Length 1,562 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RKR1Q04781 SOP4YJL192C 705 nt5.08□□□□□ -1.6
RKR1Q04781 TIR2YOR010C 756 nt5.08□□□□□ -1.6
RKR1Q04781 PBP2YBR233W 1242 nt5.08□□□□□ -1.6
RKR1Q04781 PCA1YBR295W 3651 nt5.08□□□□□ -1.6
RKR1Q04781 RRN7YJL025W 1545 nt5.08□□□□□ -1.6
RKR1Q04781 GAL11YOL051W 3246 nt5.08□□□□□ -1.6
RKR1Q04781 WRS1YOL097C 1299 nt5.08□□□□□ -1.6
RKR1Q04781 NTO1YPR031W 2247 nt5.07□□□□□ -1.6
RKR1Q04781 NAM2YLR382C 2685 nt5.07□□□□□ -1.6
RKR1Q04781 HCA4YJL033W 2313 nt5.07□□□□□ -1.6
RKR1Q04781 EMW1YNL313C 2715 nt5.07□□□□□ -1.6
RKR1Q04781 TRP4YDR354W 1143 nt5.07□□□□□ -1.6
RKR1Q04781 IRC18YJL037W 675 nt5.07□□□□□ -1.6
RKR1Q04781 YRA2YKL214C 612 nt5.07□□□□□ -1.6
RKR1Q04781 TEM1YML064C 738 nt5.07□□□□□ -1.6
RKR1Q04781 SHG1YBR258C 429 nt5.07□□□□□ -1.6
RKR1Q04781 UBA2YDR390C 1911 nt5.06□□□□□ -1.6
RKR1Q04781 tQ(UUG)BtQ(UUG)B 72 nt5.06□□□□□ -1.6
RKR1Q04781 DNM1YLL001W 2274 nt5.06□□□□□ -1.6
RKR1Q04781 THR4YCR053W 1545 nt5.06□□□□□ -1.6
RKR1Q04781 DNA2YHR164C 4569 nt5.06□□□□□ -1.6
RKR1Q04781 NAB6YML117W 3405 nt5.04□□□□□ -1.6
RKR1Q04781 ASN1YPR145W 1719 nt5.04□□□□□ -1.6
RKR1Q04781 YKL033W-AYKL033W-A 711 nt5.04□□□□□ -1.6
RKR1Q04781 YNL247WYNL247W 2304 nt5.04□□□□□ -1.6
RKR1Q04781 RAD54YGL163C 2697 nt5.04□□□□□ -1.6
RKR1Q04781 MRPS35YGR165W 1038 nt5.04□□□□□ -1.6
RKR1Q04781 FAA3YIL009W 2085 nt5.03□□□□□ -1.6
RKR1Q04781 BLM10YFL007W 6432 nt5.03□□□□□ -1.6
RKR1Q04781 ERG2YMR202W 669 nt5.03□□□□□ -1.6
RKR1Q04781 VPS21YOR089C 633 nt5.03□□□□□ -1.6
RKR1Q04781 AVT7YIL088C 1473 nt5.02□□□□□ -1.61
RKR1Q04781 OSH3YHR073W 2991 nt5.02□□□□□ -1.61
RKR1Q04781 ATG11YPR049C 3537 nt5.02□□□□□ -1.61
RKR1Q04781 IFM1YOL023W 2031 nt5.02□□□□□ -1.61
RKR1Q04781 YOL153CYOL153C 1746 nt5.02□□□□□ -1.61
RKR1Q04781 RFM1YOR279C 933 nt5.02□□□□□ -1.61
RKR1Q04781 RPO26YPR187W 468 nt5.02□□□□□ -1.61
RKR1Q04781 RAD53YPL153C 2466 nt5.02□□□□□ -1.61
RKR1Q04781 TPO2YGR138C 1845 nt5.02□□□□□ -1.61
RKR1Q04781 RPL30YGL030W 318 nt5.01□□□□□ -1.61
RKR1Q04781 YPL260WYPL260W 1656 nt5.01□□□□□ -1.61
RKR1Q04781 SNF2YOR290C 5112 nt5.01□□□□□ -1.61
RKR1Q04781 SYT1YPR095C 3681 nt5.01□□□□□ -1.61
RKR1Q04781 GRX4YER174C 735 nt5□□□□□ -1.61
RKR1Q04781 ECM34YHL043W 513 nt5□□□□□ -1.61
RKR1Q04781 ARO4YBR249C 1113 nt5□□□□□ -1.61
RKR1Q04781 ORC1YML065W 2745 nt5□□□□□ -1.61
RKR1Q04781 TMN2YDR107C 2019 nt5□□□□□ -1.61
RKR1Q04781 PRP9YDL030W 1593 nt4.99□□□□□ -1.61
RKR1Q04781 ENA2YDR039C 3276 nt4.99□□□□□ -1.61
RKR1Q04781 ENA1YDR040C 3276 nt4.99□□□□□ -1.61
RKR1Q04781 CUE3YGL110C 1875 nt4.99□□□□□ -1.61
RKR1Q04781 YGL074CYGL074C 327 nt4.99□□□□□ -1.61
RKR1Q04781 PRE8YML092C 753 nt4.99□□□□□ -1.61
RKR1Q04781 SUI3YPL237W 858 nt4.99□□□□□ -1.61
RKR1Q04781 CHO2YGR157W 2610 nt4.99□□□□□ -1.61
RKR1Q04781 GYP6YJL044C 1377 nt4.98□□□□□ -1.61
RKR1Q04781 SEC18YBR080C 2277 nt4.98□□□□□ -1.61
RKR1Q04781 BIO2YGR286C 1128 nt4.98□□□□□ -1.61
RKR1Q04781 DOG2YHR043C 741 nt4.98□□□□□ -1.61
RKR1Q04781 RUF5-1RUF5-1 710 nt4.98□□□□□ -1.61
RKR1Q04781 RUF5-2RUF5-2 710 nt4.98□□□□□ -1.61
RKR1Q04781 YOL107WYOL107W 1029 nt4.98□□□□□ -1.61
RKR1Q04781 DEG1YFL001W 1329 nt4.98□□□□□ -1.61
RKR1Q04781 GEM1YAL048C 1989 nt4.98□□□□□ -1.61
RKR1Q04781 ENT3YJR125C 1227 nt4.97□□□□□ -1.61
RKR1Q04781 MEK1YOR351C 1494 nt4.97□□□□□ -1.61
RKR1Q04781 SYF1YDR416W 2580 nt4.97□□□□□ -1.61
RKR1Q04781 UBP5YER144C 2418 nt4.96□□□□□ -1.61
RKR1Q04781 CFD1YIL003W 882 nt4.96□□□□□ -1.62
RKR1Q04781 YJR020WYJR020W 333 nt4.96□□□□□ -1.62
RKR1Q04781 PIR1YKL164C 1026 nt4.96□□□□□ -1.62
RKR1Q04781 NCE103YNL036W 666 nt4.96□□□□□ -1.62
RKR1Q04781 YBR126W-AYBR126W-A 207 nt4.96□□□□□ -1.62
RKR1Q04781 VAC7YNL054W 3498 nt4.96□□□□□ -1.62
RKR1Q04781 TCB2YNL087W 3537 nt4.96□□□□□ -1.62
RKR1Q04781 LPP1YDR503C 825 nt4.95□□□□□ -1.62
RKR1Q04781 RPS12YOR369C 432 nt4.95□□□□□ -1.62
RKR1Q04781 TYW1YPL207W 2433 nt4.95□□□□□ -1.62
RKR1Q04781 YPK9YOR291W 4419 nt4.95□□□□□ -1.62
RKR1Q04781 ALA1YOR335C 2877 nt4.95□□□□□ -1.62
RKR1Q04781 TGL3YMR313C 1929 nt4.95□□□□□ -1.62
RKR1Q04781 THI20YOL055C 1656 nt4.95□□□□□ -1.62
RKR1Q04781 STV1YMR054W 2673 nt4.95□□□□□ -1.62
RKR1Q04781 CMR1YDL156W 1569 nt4.94□□□□□ -1.62
RKR1Q04781 STU2YLR045C 2667 nt4.94□□□□□ -1.62
RKR1Q04781 PCI8YIL071C 1335 nt4.94□□□□□ -1.62
RKR1Q04781 SED5YLR026C 1023 nt4.94□□□□□ -1.62
RKR1Q04781 YPR108W-AYPR108W-A 213 nt4.94□□□□□ -1.62
RKR1Q04781 ARR1YPR199C 885 nt4.94□□□□□ -1.62
RKR1Q04781 GRC3YLL035W 1899 nt4.94□□□□□ -1.62
RKR1Q04781 FMP30YPL103C 1407 nt4.93□□□□□ -1.62
RKR1Q04781 ASI1YMR119W 1875 nt4.93□□□□□ -1.62
RKR1Q04781 GCN5YGR252W 1320 nt4.93□□□□□ -1.62
RKR1Q04781 PHM8YER037W 966 nt4.93□□□□□ -1.62
RKR1Q04781 REE1YJL217W 597 nt4.93□□□□□ -1.62
RKR1Q04781 HER2YMR293C 1395 nt4.92□□□□□ -1.62
RKR1Q04781 BCD1YHR040W 1101 nt4.92□□□□□ -1.62
RKR1Q04781 TGS1YPL157W 948 nt4.92□□□□□ -1.62
Retrieved 100 of 7,029 protein–RNA pairs in 21.3 ms