Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.25■□□□□ 0.99
HMGCS1Q01581 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.25■□□□□ 0.99
HMGCS1Q01581 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.25■□□□□ 0.99
HMGCS1Q01581 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
HMGCS1Q01581 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
HMGCS1Q01581 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HMGCS1Q01581 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
HMGCS1Q01581 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HMGCS1Q01581 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
HMGCS1Q01581 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HMGCS1Q01581 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HMGCS1Q01581 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC21.24■□□□□ 0.99
HMGCS1Q01581 DUX4L4-201ENST00000566884 1269 ntBASIC21.24■□□□□ 0.99
HMGCS1Q01581 TRIR-205ENST00000592273 783 ntTSL 3 BASIC21.24■□□□□ 0.99
HMGCS1Q01581 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
HMGCS1Q01581 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
HMGCS1Q01581 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HMGCS1Q01581 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
HMGCS1Q01581 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HMGCS1Q01581 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HMGCS1Q01581 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
HMGCS1Q01581 CREM-229ENST00000474362 1030 ntTSL 2 BASIC21.23■□□□□ 0.99
HMGCS1Q01581 UNC93B8-201ENST00000511903 705 ntBASIC21.23■□□□□ 0.99
HMGCS1Q01581 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HMGCS1Q01581 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.23■□□□□ 0.99
HMGCS1Q01581 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
HMGCS1Q01581 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HMGCS1Q01581 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HMGCS1Q01581 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
HMGCS1Q01581 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.23■□□□□ 0.99
HMGCS1Q01581 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.23■□□□□ 0.99
HMGCS1Q01581 AC139530.1-201ENST00000575312 1977 ntBASIC21.23■□□□□ 0.99
HMGCS1Q01581 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HMGCS1Q01581 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HMGCS1Q01581 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.22■□□□□ 0.99
HMGCS1Q01581 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
HMGCS1Q01581 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HMGCS1Q01581 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
HMGCS1Q01581 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.22■□□□□ 0.99
HMGCS1Q01581 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
HMGCS1Q01581 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.22■□□□□ 0.99
HMGCS1Q01581 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.22■□□□□ 0.99
HMGCS1Q01581 OR2A1-AS1-204ENST00000470435 602 ntBASIC21.22■□□□□ 0.99
HMGCS1Q01581 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HMGCS1Q01581 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
HMGCS1Q01581 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HMGCS1Q01581 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
HMGCS1Q01581 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.22■□□□□ 0.99
HMGCS1Q01581 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.22■□□□□ 0.99
HMGCS1Q01581 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.21■□□□□ 0.99
HMGCS1Q01581 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
HMGCS1Q01581 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
HMGCS1Q01581 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HMGCS1Q01581 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HMGCS1Q01581 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC21.21■□□□□ 0.99
HMGCS1Q01581 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HMGCS1Q01581 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC21.21■□□□□ 0.99
HMGCS1Q01581 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.21■□□□□ 0.99
HMGCS1Q01581 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HMGCS1Q01581 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
HMGCS1Q01581 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
HMGCS1Q01581 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HMGCS1Q01581 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
HMGCS1Q01581 CLDN5-201ENST00000403084 2357 ntBASIC21.21■□□□□ 0.99
HMGCS1Q01581 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.99
HMGCS1Q01581 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.2■□□□□ 0.99
HMGCS1Q01581 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HMGCS1Q01581 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HMGCS1Q01581 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HMGCS1Q01581 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
HMGCS1Q01581 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
HMGCS1Q01581 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HMGCS1Q01581 AC009086.3-201ENST00000623486 1008 ntBASIC21.2■□□□□ 0.98
HMGCS1Q01581 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
HMGCS1Q01581 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HMGCS1Q01581 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HMGCS1Q01581 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
HMGCS1Q01581 C17orf82-201ENST00000623772 1530 ntBASIC21.19■□□□□ 0.98
HMGCS1Q01581 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HMGCS1Q01581 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
HMGCS1Q01581 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
HMGCS1Q01581 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HMGCS1Q01581 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
HMGCS1Q01581 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
HMGCS1Q01581 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC21.19■□□□□ 0.98
HMGCS1Q01581 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
HMGCS1Q01581 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HMGCS1Q01581 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HMGCS1Q01581 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
HMGCS1Q01581 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
HMGCS1Q01581 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HMGCS1Q01581 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HMGCS1Q01581 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
HMGCS1Q01581 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
HMGCS1Q01581 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HMGCS1Q01581 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
HMGCS1Q01581 AC004687.1-201ENST00000579003 1625 ntBASIC21.18■□□□□ 0.98
HMGCS1Q01581 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HMGCS1Q01581 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
HMGCS1Q01581 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms