Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
HIST1H3AP68431 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HIST1H3AP68431 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC19.29■□□□□ 0.68
HIST1H3AP68431 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
HIST1H3AP68431 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HIST1H3AP68431 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HIST1H3AP68431 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
HIST1H3AP68431 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.29■□□□□ 0.68
HIST1H3AP68431 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
HIST1H3AP68431 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC19.29■□□□□ 0.68
HIST1H3AP68431 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.29■□□□□ 0.68
HIST1H3AP68431 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.29■□□□□ 0.68
HIST1H3AP68431 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.29■□□□□ 0.68
HIST1H3AP68431 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HIST1H3AP68431 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HIST1H3AP68431 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HIST1H3AP68431 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.29■□□□□ 0.68
HIST1H3AP68431 AC004687.1-201ENST00000579003 1625 ntBASIC19.29■□□□□ 0.68
HIST1H3AP68431 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HIST1H3AP68431 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HIST1H3AP68431 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HIST1H3AP68431 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HIST1H3AP68431 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC19.28■□□□□ 0.68
HIST1H3AP68431 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HIST1H3AP68431 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.28■□□□□ 0.68
HIST1H3AP68431 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.28■□□□□ 0.68
HIST1H3AP68431 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC19.28■□□□□ 0.68
HIST1H3AP68431 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
HIST1H3AP68431 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HIST1H3AP68431 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.28■□□□□ 0.68
HIST1H3AP68431 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HIST1H3AP68431 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
HIST1H3AP68431 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HIST1H3AP68431 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
HIST1H3AP68431 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HIST1H3AP68431 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HIST1H3AP68431 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HIST1H3AP68431 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HIST1H3AP68431 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC19.27■□□□□ 0.68
HIST1H3AP68431 AC242852.2-201ENST00000615738 1807 ntBASIC19.27■□□□□ 0.68
HIST1H3AP68431 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
HIST1H3AP68431 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.27■□□□□ 0.67
HIST1H3AP68431 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
HIST1H3AP68431 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.26■□□□□ 0.67
HIST1H3AP68431 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.26■□□□□ 0.67
HIST1H3AP68431 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HIST1H3AP68431 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
HIST1H3AP68431 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HIST1H3AP68431 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
HIST1H3AP68431 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HIST1H3AP68431 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HIST1H3AP68431 AC006455.2-201ENST00000429931 906 ntBASIC19.26■□□□□ 0.67
HIST1H3AP68431 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
HIST1H3AP68431 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.26■□□□□ 0.67
HIST1H3AP68431 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HIST1H3AP68431 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
HIST1H3AP68431 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
HIST1H3AP68431 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.25■□□□□ 0.67
HIST1H3AP68431 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
HIST1H3AP68431 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HIST1H3AP68431 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HIST1H3AP68431 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HIST1H3AP68431 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HIST1H3AP68431 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HIST1H3AP68431 SRR-208ENST00000576848 588 ntTSL 4 BASIC19.25■□□□□ 0.67
HIST1H3AP68431 AC099791.2-201ENST00000605725 427 ntBASIC19.25■□□□□ 0.67
HIST1H3AP68431 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
HIST1H3AP68431 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
HIST1H3AP68431 LINC01960-201ENST00000563759 1884 ntBASIC19.24■□□□□ 0.67
HIST1H3AP68431 LINC00526-201ENST00000581067 1875 ntBASIC19.24■□□□□ 0.67
HIST1H3AP68431 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HIST1H3AP68431 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HIST1H3AP68431 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HIST1H3AP68431 RPP21-222ENST00000433076 577 ntTSL 2 BASIC19.24■□□□□ 0.67
HIST1H3AP68431 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.24■□□□□ 0.67
HIST1H3AP68431 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.24■□□□□ 0.67
HIST1H3AP68431 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
HIST1H3AP68431 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
HIST1H3AP68431 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.24■□□□□ 0.67
HIST1H3AP68431 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HIST1H3AP68431 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HIST1H3AP68431 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.24■□□□□ 0.67
HIST1H3AP68431 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HIST1H3AP68431 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
HIST1H3AP68431 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HIST1H3AP68431 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HIST1H3AP68431 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
HIST1H3AP68431 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HIST1H3AP68431 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HIST1H3AP68431 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HIST1H3AP68431 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HIST1H3AP68431 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HIST1H3AP68431 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HIST1H3AP68431 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HIST1H3AP68431 SRD5A1P1-201ENST00000442297 786 ntBASIC19.23■□□□□ 0.67
HIST1H3AP68431 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC19.23■□□□□ 0.67
HIST1H3AP68431 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HIST1H3AP68431 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
HIST1H3AP68431 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
HIST1H3AP68431 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms