Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAB5BP61020 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAB5BP61020 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAB5BP61020 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC17.34■□□□□ 0.37
RAB5BP61020 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC17.34■□□□□ 0.37
RAB5BP61020 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAB5BP61020 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
RAB5BP61020 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RAB5BP61020 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC17.33■□□□□ 0.36
RAB5BP61020 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RAB5BP61020 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RAB5BP61020 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
RAB5BP61020 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
RAB5BP61020 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC17.33■□□□□ 0.36
RAB5BP61020 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RAB5BP61020 AC087289.5-201ENST00000586076 3175 ntBASIC17.33■□□□□ 0.36
RAB5BP61020 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
RAB5BP61020 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RAB5BP61020 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RAB5BP61020 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
RAB5BP61020 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RAB5BP61020 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RAB5BP61020 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC17.33■□□□□ 0.36
RAB5BP61020 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RAB5BP61020 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.32■□□□□ 0.36
RAB5BP61020 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.32■□□□□ 0.36
RAB5BP61020 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RAB5BP61020 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB5BP61020 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
RAB5BP61020 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.32■□□□□ 0.36
RAB5BP61020 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
RAB5BP61020 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB5BP61020 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB5BP61020 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB5BP61020 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB5BP61020 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB5BP61020 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB5BP61020 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
RAB5BP61020 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
RAB5BP61020 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
RAB5BP61020 AC139530.1-201ENST00000575312 1977 ntBASIC17.31■□□□□ 0.36
RAB5BP61020 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB5BP61020 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RAB5BP61020 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC17.31■□□□□ 0.36
RAB5BP61020 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB5BP61020 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RAB5BP61020 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.31■□□□□ 0.36
RAB5BP61020 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC17.31■□□□□ 0.36
RAB5BP61020 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC17.31■□□□□ 0.36
RAB5BP61020 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
RAB5BP61020 AC026471.1-201ENST00000564629 3026 ntBASIC17.31■□□□□ 0.36
RAB5BP61020 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB5BP61020 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB5BP61020 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RAB5BP61020 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC17.31■□□□□ 0.36
RAB5BP61020 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RAB5BP61020 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB5BP61020 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB5BP61020 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB5BP61020 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RAB5BP61020 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.31■□□□□ 0.36
RAB5BP61020 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RAB5BP61020 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RAB5BP61020 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RAB5BP61020 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB5BP61020 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB5BP61020 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
RAB5BP61020 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB5BP61020 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB5BP61020 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB5BP61020 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB5BP61020 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
RAB5BP61020 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
RAB5BP61020 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
RAB5BP61020 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB5BP61020 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB5BP61020 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
RAB5BP61020 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB5BP61020 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB5BP61020 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RAB5BP61020 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
RAB5BP61020 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
RAB5BP61020 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC17.29■□□□□ 0.36
RAB5BP61020 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB5BP61020 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB5BP61020 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB5BP61020 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RAB5BP61020 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC17.29■□□□□ 0.36
RAB5BP61020 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC17.29■□□□□ 0.36
RAB5BP61020 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
RAB5BP61020 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB5BP61020 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC17.29■□□□□ 0.36
RAB5BP61020 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB5BP61020 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB5BP61020 LSR-205ENST00000427250 1606 ntTSL 2 BASIC17.29■□□□□ 0.36
RAB5BP61020 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB5BP61020 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RAB5BP61020 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB5BP61020 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC17.28■□□□□ 0.36
RAB5BP61020 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms