Protein–RNA interactions for Protein: P60468

SEC61B, Protein transport protein Sec61 subunit beta, humanhuman

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61BP60468 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SEC61BP60468 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SEC61BP60468 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SEC61BP60468 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SEC61BP60468 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
SEC61BP60468 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
SEC61BP60468 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SEC61BP60468 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC11.87□□□□□ -0.51
SEC61BP60468 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC11.87□□□□□ -0.51
SEC61BP60468 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC11.87□□□□□ -0.51
SEC61BP60468 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC11.87□□□□□ -0.51
SEC61BP60468 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC11.87□□□□□ -0.51
SEC61BP60468 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC11.87□□□□□ -0.51
SEC61BP60468 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC11.87□□□□□ -0.51
SEC61BP60468 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC11.87□□□□□ -0.51
SEC61BP60468 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
SEC61BP60468 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
SEC61BP60468 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC11.87□□□□□ -0.51
SEC61BP60468 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
SEC61BP60468 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
SEC61BP60468 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SEC61BP60468 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SEC61BP60468 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SEC61BP60468 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
SEC61BP60468 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
SEC61BP60468 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SEC61BP60468 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SEC61BP60468 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SEC61BP60468 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
SEC61BP60468 EED-207ENST00000528180 1745 ntTSL 5 BASIC11.86□□□□□ -0.51
SEC61BP60468 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SEC61BP60468 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC11.86□□□□□ -0.51
SEC61BP60468 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC11.86□□□□□ -0.51
SEC61BP60468 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
SEC61BP60468 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC11.86□□□□□ -0.51
SEC61BP60468 AL031602.1-201ENST00000633169 911 ntBASIC11.86□□□□□ -0.51
SEC61BP60468 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
SEC61BP60468 STX4-202ENST00000394998 1498 ntTSL 2 BASIC11.86□□□□□ -0.51
SEC61BP60468 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC11.86□□□□□ -0.51
SEC61BP60468 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
SEC61BP60468 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
SEC61BP60468 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SEC61BP60468 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
SEC61BP60468 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
SEC61BP60468 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SEC61BP60468 EI24-213ENST00000618552 1747 ntTSL 5 BASIC11.86□□□□□ -0.51
SEC61BP60468 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
SEC61BP60468 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
SEC61BP60468 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC11.85□□□□□ -0.51
SEC61BP60468 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
SEC61BP60468 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC11.85□□□□□ -0.51
SEC61BP60468 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
SEC61BP60468 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC11.85□□□□□ -0.51
SEC61BP60468 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
SEC61BP60468 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
SEC61BP60468 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC11.85□□□□□ -0.51
SEC61BP60468 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
SEC61BP60468 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
SEC61BP60468 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
SEC61BP60468 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC11.85□□□□□ -0.51
SEC61BP60468 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
SEC61BP60468 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SEC61BP60468 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC11.85□□□□□ -0.51
SEC61BP60468 TERF1P2-201ENST00000583350 1212 ntBASIC11.85□□□□□ -0.51
SEC61BP60468 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC11.85□□□□□ -0.51
SEC61BP60468 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC11.85□□□□□ -0.51
SEC61BP60468 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
SEC61BP60468 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC11.85□□□□□ -0.51
SEC61BP60468 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SEC61BP60468 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SEC61BP60468 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SEC61BP60468 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC11.85□□□□□ -0.51
SEC61BP60468 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC11.85□□□□□ -0.51
SEC61BP60468 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SEC61BP60468 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SEC61BP60468 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
SEC61BP60468 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SEC61BP60468 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC11.84□□□□□ -0.51
SEC61BP60468 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC11.84□□□□□ -0.51
SEC61BP60468 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SEC61BP60468 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SEC61BP60468 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SEC61BP60468 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
SEC61BP60468 AC135731.1-201ENST00000569415 2548 ntBASIC11.84□□□□□ -0.51
SEC61BP60468 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC11.84□□□□□ -0.51
SEC61BP60468 AC016769.1-201ENST00000409132 1010 ntBASIC11.84□□□□□ -0.51
SEC61BP60468 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
SEC61BP60468 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
SEC61BP60468 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC11.84□□□□□ -0.51
SEC61BP60468 IKBKGP1-201ENST00000612193 1073 ntBASIC11.84□□□□□ -0.51
SEC61BP60468 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC11.84□□□□□ -0.51
SEC61BP60468 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SEC61BP60468 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
SEC61BP60468 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SEC61BP60468 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
SEC61BP60468 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SEC61BP60468 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
SEC61BP60468 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.51
SEC61BP60468 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
SEC61BP60468 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms