Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 AC004687.1-201ENST00000579003 1625 ntBASIC21.32■■□□□ 1
EPHA4P54764 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC21.31■■□□□ 1
EPHA4P54764 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
EPHA4P54764 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
EPHA4P54764 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC21.31■■□□□ 1
EPHA4P54764 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
EPHA4P54764 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC21.31■■□□□ 1
EPHA4P54764 AC034268.1-201ENST00000441047 882 ntBASIC21.31■■□□□ 1
EPHA4P54764 AL162430.1-201ENST00000480705 870 ntBASIC21.31■■□□□ 1
EPHA4P54764 AC092666.2-201ENST00000613287 246 ntBASIC21.31■■□□□ 1
EPHA4P54764 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
EPHA4P54764 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.31■■□□□ 1
EPHA4P54764 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
EPHA4P54764 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.3■■□□□ 1
EPHA4P54764 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.3■■□□□ 1
EPHA4P54764 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.3■■□□□ 1
EPHA4P54764 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
EPHA4P54764 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
EPHA4P54764 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC21.3■■□□□ 1
EPHA4P54764 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC21.3■■□□□ 1
EPHA4P54764 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
EPHA4P54764 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.3■■□□□ 1
EPHA4P54764 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.3■■□□□ 1
EPHA4P54764 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.29■■□□□ 1
EPHA4P54764 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
EPHA4P54764 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
EPHA4P54764 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.29■■□□□ 1
EPHA4P54764 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21.29■■□□□ 1
EPHA4P54764 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC21.29■■□□□ 1
EPHA4P54764 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC21.29■■□□□ 1
EPHA4P54764 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
EPHA4P54764 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.29■■□□□ 1
EPHA4P54764 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
EPHA4P54764 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC21.29■■□□□ 1
EPHA4P54764 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
EPHA4P54764 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
EPHA4P54764 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC21.28■■□□□ 1
EPHA4P54764 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.28■■□□□ 1
EPHA4P54764 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.28■■□□□ 1
EPHA4P54764 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC21.28■■□□□ 1
EPHA4P54764 RAB43-208ENST00000615093 783 ntTSL 5 BASIC21.28■■□□□ 1
EPHA4P54764 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.28■■□□□ 1
EPHA4P54764 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
EPHA4P54764 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.28■■□□□ 1
EPHA4P54764 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.28■■□□□ 1
EPHA4P54764 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.28■■□□□ 1
EPHA4P54764 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.27■■□□□ 1
EPHA4P54764 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
EPHA4P54764 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
EPHA4P54764 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.27■■□□□ 1
EPHA4P54764 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
EPHA4P54764 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC21.27■■□□□ 1
EPHA4P54764 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21.27■■□□□ 1
EPHA4P54764 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21.27■■□□□ 1
EPHA4P54764 MIR6084-201ENST00000622012 110 ntBASIC21.27■■□□□ 1
EPHA4P54764 AC087239.1-201ENST00000622671 572 ntBASIC21.27■■□□□ 1
EPHA4P54764 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.27■■□□□ 1
EPHA4P54764 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.27■□□□□ 0.99
EPHA4P54764 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
EPHA4P54764 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC21.26■□□□□ 0.99
EPHA4P54764 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC21.26■□□□□ 0.99
EPHA4P54764 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
EPHA4P54764 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
EPHA4P54764 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
EPHA4P54764 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC21.26■□□□□ 0.99
EPHA4P54764 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
EPHA4P54764 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
EPHA4P54764 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC21.26■□□□□ 0.99
EPHA4P54764 AC105233.4-201ENST00000642045 216 ntBASIC21.26■□□□□ 0.99
EPHA4P54764 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
EPHA4P54764 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.26■□□□□ 0.99
EPHA4P54764 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.26■□□□□ 0.99
EPHA4P54764 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
EPHA4P54764 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21.25■□□□□ 0.99
EPHA4P54764 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
EPHA4P54764 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
EPHA4P54764 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
EPHA4P54764 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
EPHA4P54764 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC21.25■□□□□ 0.99
EPHA4P54764 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
EPHA4P54764 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
EPHA4P54764 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
EPHA4P54764 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
EPHA4P54764 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
EPHA4P54764 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
EPHA4P54764 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
EPHA4P54764 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
EPHA4P54764 MFF-208ENST00000409616 1247 ntTSL 5 BASIC21.24■□□□□ 0.99
EPHA4P54764 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC21.24■□□□□ 0.99
EPHA4P54764 AL031602.1-201ENST00000633169 911 ntBASIC21.24■□□□□ 0.99
EPHA4P54764 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
EPHA4P54764 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.24■□□□□ 0.99
EPHA4P54764 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
EPHA4P54764 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
EPHA4P54764 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
EPHA4P54764 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
EPHA4P54764 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
EPHA4P54764 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
EPHA4P54764 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
EPHA4P54764 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms