Protein–RNA interactions for Protein: P51957

NEK4, Serine/threonine-protein kinase Nek4, humanhuman

Predictions only

Length 841 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4P51957 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
NEK4P51957 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC26.31■■□□□ 1.8
NEK4P51957 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
NEK4P51957 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
NEK4P51957 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
NEK4P51957 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC26.3■■□□□ 1.8
NEK4P51957 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
NEK4P51957 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
NEK4P51957 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
NEK4P51957 RARRES2P1-201ENST00000474487 481 ntBASIC26.29■■□□□ 1.8
NEK4P51957 Z92544.1-202ENST00000571933 1220 ntBASIC26.29■■□□□ 1.8
NEK4P51957 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
NEK4P51957 AC092053.2-201ENST00000640557 1818 ntBASIC26.29■■□□□ 1.8
NEK4P51957 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
NEK4P51957 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC26.29■■□□□ 1.8
NEK4P51957 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC26.29■■□□□ 1.8
NEK4P51957 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
NEK4P51957 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC26.28■■□□□ 1.8
NEK4P51957 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
NEK4P51957 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC26.28■■□□□ 1.8
NEK4P51957 MIR4787-201ENST00000607364 84 ntBASIC26.28■■□□□ 1.8
NEK4P51957 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
NEK4P51957 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
NEK4P51957 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC26.28■■□□□ 1.8
NEK4P51957 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
NEK4P51957 AC009102.2-201ENST00000606772 1639 ntBASIC26.28■■□□□ 1.8
NEK4P51957 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
NEK4P51957 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC26.28■■□□□ 1.8
NEK4P51957 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
NEK4P51957 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
NEK4P51957 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
NEK4P51957 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC26.27■■□□□ 1.8
NEK4P51957 HES6-204ENST00000409182 863 ntTSL 2 BASIC26.27■■□□□ 1.8
NEK4P51957 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
NEK4P51957 DUX4L4-201ENST00000566884 1269 ntBASIC26.27■■□□□ 1.8
NEK4P51957 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
NEK4P51957 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC26.27■■□□□ 1.8
NEK4P51957 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
NEK4P51957 AC137767.1-201ENST00000602918 1920 ntBASIC26.27■■□□□ 1.8
NEK4P51957 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC26.27■■□□□ 1.8
NEK4P51957 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
NEK4P51957 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
NEK4P51957 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC26.27■■□□□ 1.8
NEK4P51957 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
NEK4P51957 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC26.26■■□□□ 1.79
NEK4P51957 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC26.26■■□□□ 1.79
NEK4P51957 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC26.26■■□□□ 1.79
NEK4P51957 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
NEK4P51957 NKILA-201ENST00000613231 537 ntTSL 4 BASIC26.26■■□□□ 1.79
NEK4P51957 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
NEK4P51957 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
NEK4P51957 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
NEK4P51957 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
NEK4P51957 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
NEK4P51957 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC26.25■■□□□ 1.79
NEK4P51957 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
NEK4P51957 AC239859.2-201ENST00000444165 318 ntBASIC26.25■■□□□ 1.79
NEK4P51957 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC26.25■■□□□ 1.79
NEK4P51957 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC26.25■■□□□ 1.79
NEK4P51957 MTDHP2-201ENST00000601468 714 ntBASIC26.25■■□□□ 1.79
NEK4P51957 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
NEK4P51957 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC26.25■■□□□ 1.79
NEK4P51957 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
NEK4P51957 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
NEK4P51957 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
NEK4P51957 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
NEK4P51957 CD72-202ENST00000378430 585 ntTSL 3 BASIC26.24■■□□□ 1.79
NEK4P51957 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC26.24■■□□□ 1.79
NEK4P51957 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
NEK4P51957 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
NEK4P51957 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
NEK4P51957 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
NEK4P51957 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
NEK4P51957 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC26.23■■□□□ 1.79
NEK4P51957 C11orf96-202ENST00000528572 1834 ntBASIC26.23■■□□□ 1.79
NEK4P51957 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
NEK4P51957 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
NEK4P51957 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
NEK4P51957 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
NEK4P51957 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
NEK4P51957 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
NEK4P51957 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC26.22■■□□□ 1.79
NEK4P51957 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC26.22■■□□□ 1.79
NEK4P51957 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC26.22■■□□□ 1.79
NEK4P51957 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
NEK4P51957 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
NEK4P51957 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC26.22■■□□□ 1.79
NEK4P51957 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC26.22■■□□□ 1.79
NEK4P51957 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC26.22■■□□□ 1.79
NEK4P51957 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC26.21■■□□□ 1.79
NEK4P51957 AC009086.3-201ENST00000623486 1008 ntBASIC26.21■■□□□ 1.79
NEK4P51957 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
NEK4P51957 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC26.21■■□□□ 1.79
NEK4P51957 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
NEK4P51957 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC26.21■■□□□ 1.79
NEK4P51957 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
NEK4P51957 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC26.2■■□□□ 1.79
NEK4P51957 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC26.2■■□□□ 1.78
NEK4P51957 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
NEK4P51957 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms