Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.39■□□□□ 0.69
HCFC1P51610 AC073111.5-205ENST00000641717 521 ntBASIC19.39■□□□□ 0.69
HCFC1P51610 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
HCFC1P51610 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HCFC1P51610 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HCFC1P51610 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HCFC1P51610 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HCFC1P51610 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
HCFC1P51610 AC006015.1-201ENST00000429970 570 ntBASIC19.38■□□□□ 0.69
HCFC1P51610 EMC9-206ENST00000560403 872 ntTSL 2 BASIC19.38■□□□□ 0.69
HCFC1P51610 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.38■□□□□ 0.69
HCFC1P51610 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.38■□□□□ 0.69
HCFC1P51610 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.38■□□□□ 0.69
HCFC1P51610 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.38■□□□□ 0.69
HCFC1P51610 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC19.38■□□□□ 0.69
HCFC1P51610 AC138932.3-201ENST00000567634 1902 ntBASIC19.38■□□□□ 0.69
HCFC1P51610 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.37■□□□□ 0.69
HCFC1P51610 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.37■□□□□ 0.69
HCFC1P51610 AC105233.4-201ENST00000642045 216 ntBASIC19.37■□□□□ 0.69
HCFC1P51610 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HCFC1P51610 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.37■□□□□ 0.69
HCFC1P51610 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HCFC1P51610 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HCFC1P51610 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HCFC1P51610 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HCFC1P51610 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HCFC1P51610 CDCA4P2-201ENST00000441182 718 ntBASIC19.37■□□□□ 0.69
HCFC1P51610 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC19.37■□□□□ 0.69
HCFC1P51610 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.37■□□□□ 0.69
HCFC1P51610 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC19.37■□□□□ 0.69
HCFC1P51610 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.37■□□□□ 0.69
HCFC1P51610 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HCFC1P51610 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
HCFC1P51610 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HCFC1P51610 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HCFC1P51610 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.36■□□□□ 0.69
HCFC1P51610 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
HCFC1P51610 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.36■□□□□ 0.69
HCFC1P51610 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HCFC1P51610 AP004607.4-201ENST00000530158 1459 ntBASIC19.36■□□□□ 0.69
HCFC1P51610 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HCFC1P51610 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HCFC1P51610 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
HCFC1P51610 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
HCFC1P51610 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.35■□□□□ 0.69
HCFC1P51610 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.35■□□□□ 0.69
HCFC1P51610 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.35■□□□□ 0.69
HCFC1P51610 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HCFC1P51610 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HCFC1P51610 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
HCFC1P51610 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HCFC1P51610 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HCFC1P51610 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.35■□□□□ 0.69
HCFC1P51610 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HCFC1P51610 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HCFC1P51610 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
HCFC1P51610 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.34■□□□□ 0.69
HCFC1P51610 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HCFC1P51610 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HCFC1P51610 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HCFC1P51610 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
HCFC1P51610 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HCFC1P51610 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
HCFC1P51610 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.34■□□□□ 0.69
HCFC1P51610 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HCFC1P51610 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HCFC1P51610 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
HCFC1P51610 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.34■□□□□ 0.69
HCFC1P51610 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HCFC1P51610 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.34■□□□□ 0.69
HCFC1P51610 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HCFC1P51610 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
HCFC1P51610 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HCFC1P51610 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.33■□□□□ 0.68
HCFC1P51610 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.33■□□□□ 0.68
HCFC1P51610 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.33■□□□□ 0.68
HCFC1P51610 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
HCFC1P51610 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
HCFC1P51610 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HCFC1P51610 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
HCFC1P51610 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HCFC1P51610 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.32■□□□□ 0.68
HCFC1P51610 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.32■□□□□ 0.68
HCFC1P51610 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.32■□□□□ 0.68
HCFC1P51610 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
HCFC1P51610 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HCFC1P51610 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
HCFC1P51610 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HCFC1P51610 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HCFC1P51610 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HCFC1P51610 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.32■□□□□ 0.68
HCFC1P51610 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
HCFC1P51610 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.32■□□□□ 0.68
HCFC1P51610 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.32■□□□□ 0.68
HCFC1P51610 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HCFC1P51610 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.31■□□□□ 0.68
HCFC1P51610 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HCFC1P51610 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
HCFC1P51610 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HCFC1P51610 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms