Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.86■□□□□ 0.77
CENPAP49450 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
CENPAP49450 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.86■□□□□ 0.77
CENPAP49450 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CENPAP49450 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
CENPAP49450 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CENPAP49450 RARRES2P1-201ENST00000474487 481 ntBASIC19.86■□□□□ 0.77
CENPAP49450 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.86■□□□□ 0.77
CENPAP49450 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.86■□□□□ 0.77
CENPAP49450 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CENPAP49450 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
CENPAP49450 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CENPAP49450 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.85■□□□□ 0.77
CENPAP49450 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.85■□□□□ 0.77
CENPAP49450 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
CENPAP49450 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.85■□□□□ 0.77
CENPAP49450 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CENPAP49450 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CENPAP49450 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CENPAP49450 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CENPAP49450 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
CENPAP49450 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC19.85■□□□□ 0.77
CENPAP49450 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.85■□□□□ 0.77
CENPAP49450 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
CENPAP49450 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CENPAP49450 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CENPAP49450 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CENPAP49450 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.85■□□□□ 0.77
CENPAP49450 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CENPAP49450 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.85■□□□□ 0.77
CENPAP49450 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CENPAP49450 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CENPAP49450 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CENPAP49450 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC19.84■□□□□ 0.77
CENPAP49450 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
CENPAP49450 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
CENPAP49450 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.84■□□□□ 0.77
CENPAP49450 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CENPAP49450 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CENPAP49450 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC19.84■□□□□ 0.77
CENPAP49450 AC138932.1-201ENST00000534164 6830 ntBASIC19.84■□□□□ 0.77
CENPAP49450 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CENPAP49450 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
CENPAP49450 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CENPAP49450 ECEL1P1-201ENST00000373592 1742 ntBASIC19.83■□□□□ 0.77
CENPAP49450 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CENPAP49450 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC19.83■□□□□ 0.77
CENPAP49450 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CENPAP49450 MIR6722-201ENST00000617286 78 ntBASIC19.83■□□□□ 0.77
CENPAP49450 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CENPAP49450 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
CENPAP49450 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
CENPAP49450 AC144652.1-201ENST00000609974 1624 ntBASIC19.83■□□□□ 0.76
CENPAP49450 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
CENPAP49450 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CENPAP49450 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CENPAP49450 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.82■□□□□ 0.76
CENPAP49450 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CENPAP49450 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CENPAP49450 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.82■□□□□ 0.76
CENPAP49450 AC239859.2-201ENST00000444165 318 ntBASIC19.82■□□□□ 0.76
CENPAP49450 MTDHP2-201ENST00000601468 714 ntBASIC19.82■□□□□ 0.76
CENPAP49450 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CENPAP49450 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CENPAP49450 GUSBP5-202ENST00000510805 1989 ntBASIC19.82■□□□□ 0.76
CENPAP49450 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CENPAP49450 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CENPAP49450 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CENPAP49450 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.82■□□□□ 0.76
CENPAP49450 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CENPAP49450 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CENPAP49450 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.82■□□□□ 0.76
CENPAP49450 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
CENPAP49450 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
CENPAP49450 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
CENPAP49450 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CENPAP49450 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CENPAP49450 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.81■□□□□ 0.76
CENPAP49450 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CENPAP49450 AC127496.7-201ENST00000625110 1798 ntBASIC19.81■□□□□ 0.76
CENPAP49450 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CENPAP49450 TSPY9P-201ENST00000440215 945 ntBASIC19.81■□□□□ 0.76
CENPAP49450 TSPY11P-201ENST00000442607 1045 ntBASIC19.81■□□□□ 0.76
CENPAP49450 MIR4787-201ENST00000607364 84 ntBASIC19.81■□□□□ 0.76
CENPAP49450 AC092028.1-203ENST00000608262 953 ntBASIC19.81■□□□□ 0.76
CENPAP49450 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC19.81■□□□□ 0.76
CENPAP49450 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CENPAP49450 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CENPAP49450 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CENPAP49450 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.81■□□□□ 0.76
CENPAP49450 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
CENPAP49450 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CENPAP49450 FP325331.1-202ENST00000623531 1380 ntBASIC19.81■□□□□ 0.76
CENPAP49450 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
CENPAP49450 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC19.8■□□□□ 0.76
CENPAP49450 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CENPAP49450 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CENPAP49450 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.8■□□□□ 0.76
CENPAP49450 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
CENPAP49450 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms