Protein–RNA interactions for Protein: P48664

SLC1A6, Excitatory amino acid transporter 4, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A6P48664 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
SLC1A6P48664 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SLC1A6P48664 BHLHE23-202ENST00000612929 1109 ntBASIC21.68■■□□□ 1.06
SLC1A6P48664 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SLC1A6P48664 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.68■■□□□ 1.06
SLC1A6P48664 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.68■■□□□ 1.06
SLC1A6P48664 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.68■■□□□ 1.06
SLC1A6P48664 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.68■■□□□ 1.06
SLC1A6P48664 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SLC1A6P48664 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SLC1A6P48664 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC21.67■■□□□ 1.06
SLC1A6P48664 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SLC1A6P48664 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.67■■□□□ 1.06
SLC1A6P48664 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
SLC1A6P48664 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.67■■□□□ 1.06
SLC1A6P48664 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SLC1A6P48664 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SLC1A6P48664 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SLC1A6P48664 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC21.67■■□□□ 1.06
SLC1A6P48664 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SLC1A6P48664 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.67■■□□□ 1.06
SLC1A6P48664 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SLC1A6P48664 AC026310.3-201ENST00000625186 2373 ntBASIC21.67■■□□□ 1.06
SLC1A6P48664 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SLC1A6P48664 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
SLC1A6P48664 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SLC1A6P48664 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
SLC1A6P48664 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.66■■□□□ 1.06
SLC1A6P48664 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.66■■□□□ 1.06
SLC1A6P48664 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SLC1A6P48664 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.66■■□□□ 1.06
SLC1A6P48664 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SLC1A6P48664 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
SLC1A6P48664 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SLC1A6P48664 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.66■■□□□ 1.06
SLC1A6P48664 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.65■■□□□ 1.06
SLC1A6P48664 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SLC1A6P48664 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
SLC1A6P48664 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SLC1A6P48664 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SLC1A6P48664 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SLC1A6P48664 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC21.65■■□□□ 1.06
SLC1A6P48664 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
SLC1A6P48664 PVT1_1.1-201ENST00000615125 194 ntBASIC21.65■■□□□ 1.06
SLC1A6P48664 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC21.65■■□□□ 1.06
SLC1A6P48664 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
SLC1A6P48664 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SLC1A6P48664 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SLC1A6P48664 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.65■■□□□ 1.06
SLC1A6P48664 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.65■■□□□ 1.06
SLC1A6P48664 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
SLC1A6P48664 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SLC1A6P48664 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SLC1A6P48664 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SLC1A6P48664 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
SLC1A6P48664 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
SLC1A6P48664 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.65■■□□□ 1.06
SLC1A6P48664 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
SLC1A6P48664 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SLC1A6P48664 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
SLC1A6P48664 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
SLC1A6P48664 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
SLC1A6P48664 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SLC1A6P48664 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
SLC1A6P48664 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SLC1A6P48664 HSD17B1P1-201ENST00000590052 955 ntBASIC21.64■■□□□ 1.05
SLC1A6P48664 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SLC1A6P48664 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
SLC1A6P48664 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SLC1A6P48664 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.64■■□□□ 1.05
SLC1A6P48664 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
SLC1A6P48664 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SLC1A6P48664 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.63■■□□□ 1.05
SLC1A6P48664 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
SLC1A6P48664 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
SLC1A6P48664 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SLC1A6P48664 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SLC1A6P48664 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
SLC1A6P48664 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SLC1A6P48664 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC21.63■■□□□ 1.05
SLC1A6P48664 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC21.63■■□□□ 1.05
SLC1A6P48664 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SLC1A6P48664 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SLC1A6P48664 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SLC1A6P48664 FAM99A-202ENST00000538190 1989 ntBASIC21.63■■□□□ 1.05
SLC1A6P48664 AC010542.4-201ENST00000563151 1910 ntBASIC21.63■■□□□ 1.05
SLC1A6P48664 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SLC1A6P48664 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
SLC1A6P48664 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SLC1A6P48664 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC21.62■■□□□ 1.05
SLC1A6P48664 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SLC1A6P48664 AC074183.2-201ENST00000623112 922 ntBASIC21.62■■□□□ 1.05
SLC1A6P48664 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SLC1A6P48664 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SLC1A6P48664 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SLC1A6P48664 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SLC1A6P48664 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
SLC1A6P48664 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SLC1A6P48664 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.61■■□□□ 1.05
SLC1A6P48664 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms