Protein–RNA interactions for Protein: P46098

HTR3A, 5-hydroxytryptamine receptor 3A, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3AP46098 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HTR3AP46098 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
HTR3AP46098 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.28■□□□□ 0.84
HTR3AP46098 AL353803.4-201ENST00000565882 1934 ntBASIC20.28■□□□□ 0.84
HTR3AP46098 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.28■□□□□ 0.84
HTR3AP46098 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HTR3AP46098 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HTR3AP46098 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HTR3AP46098 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
HTR3AP46098 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
HTR3AP46098 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
HTR3AP46098 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HTR3AP46098 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HTR3AP46098 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HTR3AP46098 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HTR3AP46098 C17orf82-201ENST00000623772 1530 ntBASIC20.27■□□□□ 0.84
HTR3AP46098 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HTR3AP46098 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HTR3AP46098 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HTR3AP46098 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
HTR3AP46098 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.27■□□□□ 0.84
HTR3AP46098 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HTR3AP46098 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.27■□□□□ 0.84
HTR3AP46098 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.27■□□□□ 0.84
HTR3AP46098 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HTR3AP46098 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HTR3AP46098 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HTR3AP46098 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.27■□□□□ 0.84
HTR3AP46098 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HTR3AP46098 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.83
HTR3AP46098 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
HTR3AP46098 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
HTR3AP46098 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
HTR3AP46098 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.26■□□□□ 0.83
HTR3AP46098 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.26■□□□□ 0.83
HTR3AP46098 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
HTR3AP46098 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.26■□□□□ 0.83
HTR3AP46098 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.26■□□□□ 0.83
HTR3AP46098 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.26■□□□□ 0.83
HTR3AP46098 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
HTR3AP46098 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HTR3AP46098 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.26■□□□□ 0.83
HTR3AP46098 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.26■□□□□ 0.83
HTR3AP46098 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.26■□□□□ 0.83
HTR3AP46098 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HTR3AP46098 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HTR3AP46098 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
HTR3AP46098 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HTR3AP46098 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.25■□□□□ 0.83
HTR3AP46098 AL121603.2-201ENST00000557373 2117 ntBASIC20.25■□□□□ 0.83
HTR3AP46098 DUX4L4-201ENST00000566884 1269 ntBASIC20.25■□□□□ 0.83
HTR3AP46098 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.25■□□□□ 0.83
HTR3AP46098 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HTR3AP46098 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
HTR3AP46098 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HTR3AP46098 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.25■□□□□ 0.83
HTR3AP46098 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.25■□□□□ 0.83
HTR3AP46098 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HTR3AP46098 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HTR3AP46098 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HTR3AP46098 LINC00526-201ENST00000581067 1875 ntBASIC20.24■□□□□ 0.83
HTR3AP46098 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HTR3AP46098 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.24■□□□□ 0.83
HTR3AP46098 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HTR3AP46098 AC127496.7-201ENST00000625110 1798 ntBASIC20.24■□□□□ 0.83
HTR3AP46098 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.24■□□□□ 0.83
HTR3AP46098 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
HTR3AP46098 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.24■□□□□ 0.83
HTR3AP46098 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
HTR3AP46098 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HTR3AP46098 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
HTR3AP46098 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.24■□□□□ 0.83
HTR3AP46098 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
HTR3AP46098 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HTR3AP46098 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.23■□□□□ 0.83
HTR3AP46098 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.23■□□□□ 0.83
HTR3AP46098 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
HTR3AP46098 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
HTR3AP46098 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HTR3AP46098 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HTR3AP46098 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HTR3AP46098 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HTR3AP46098 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.23■□□□□ 0.83
HTR3AP46098 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HTR3AP46098 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HTR3AP46098 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
HTR3AP46098 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.23■□□□□ 0.83
HTR3AP46098 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HTR3AP46098 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HTR3AP46098 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HTR3AP46098 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HTR3AP46098 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.22■□□□□ 0.83
HTR3AP46098 AC241377.3-202ENST00000626088 1088 ntBASIC20.22■□□□□ 0.83
HTR3AP46098 AC241585.3-202ENST00000628937 1088 ntBASIC20.22■□□□□ 0.83
HTR3AP46098 AC245100.8-202ENST00000629247 1058 ntBASIC20.22■□□□□ 0.83
HTR3AP46098 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.22■□□□□ 0.83
HTR3AP46098 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.22■□□□□ 0.83
HTR3AP46098 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
HTR3AP46098 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HTR3AP46098 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms