Protein–RNA interactions for Protein: P38854

TDA11, Topoisomerase I damage affected protein 11, yeastyeast

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDA11P38854 TCM62YBR044C 1719 nt3.92□□□□□ -1.78
TDA11P38854 SPC19YDR201W 498 nt3.92□□□□□ -1.78
TDA11P38854 YER034WYER034W 558 nt3.92□□□□□ -1.78
TDA11P38854 YIL152WYIL152W 708 nt3.92□□□□□ -1.78
TDA11P38854 YOR379CYOR379C 339 nt3.92□□□□□ -1.78
TDA11P38854 MCM2YBL023C 2607 nt3.92□□□□□ -1.78
TDA11P38854 APM1YPL259C 1428 nt3.92□□□□□ -1.78
TDA11P38854 PRP19YLL036C 1512 nt3.91□□□□□ -1.78
TDA11P38854 DCV1YFR012W 609 nt3.91□□□□□ -1.78
TDA11P38854 YAE1YJR067C 426 nt3.91□□□□□ -1.78
TDA11P38854 YLR156WYLR156W 345 nt3.91□□□□□ -1.78
TDA11P38854 YLR159WYLR159W 345 nt3.91□□□□□ -1.78
TDA11P38854 YLR161WYLR161W 345 nt3.91□□□□□ -1.78
TDA11P38854 HEK2YBL032W 1146 nt3.91□□□□□ -1.78
TDA11P38854 INA17YPL099C 549 nt3.91□□□□□ -1.78
TDA11P38854 NCE102YPR149W 522 nt3.91□□□□□ -1.78
TDA11P38854 BSD2YBR290W 966 nt3.91□□□□□ -1.78
TDA11P38854 IOC2YLR095C 2439 nt3.91□□□□□ -1.78
TDA11P38854 OPT2YPR194C 2634 nt3.91□□□□□ -1.78
TDA11P38854 MDL1YLR188W 2088 nt3.9□□□□□ -1.78
TDA11P38854 MOB2YFL034C-B 864 nt3.9□□□□□ -1.79
TDA11P38854 YGR015CYGR015C 987 nt3.9□□□□□ -1.79
TDA11P38854 YLL017WYLL017W 312 nt3.9□□□□□ -1.79
TDA11P38854 RPS31YLR167W 459 nt3.9□□□□□ -1.79
TDA11P38854 YBR056W-AYBR056W-A 201 nt3.9□□□□□ -1.79
TDA11P38854 ARO7YPR060C 771 nt3.9□□□□□ -1.79
TDA11P38854 VPS69YPR087W 321 nt3.9□□□□□ -1.79
TDA11P38854 GCN5YGR252W 1320 nt3.9□□□□□ -1.79
TDA11P38854 MNN4YKL201C 3537 nt3.9□□□□□ -1.79
TDA11P38854 PHO12YHR215W 1404 nt3.89□□□□□ -1.79
TDA11P38854 PHO11YAR071W 1404 nt3.89□□□□□ -1.79
TDA11P38854 XRS2YDR369C 2565 nt3.89□□□□□ -1.79
TDA11P38854 SAT4YCR008W 1812 nt3.89□□□□□ -1.79
TDA11P38854 COS7YDL248W 1152 nt3.89□□□□□ -1.79
TDA11P38854 PFA5YDR459C 1125 nt3.89□□□□□ -1.79
TDA11P38854 ERV14YGL054C 417 nt3.89□□□□□ -1.79
TDA11P38854 MMS2YGL087C 414 nt3.89□□□□□ -1.79
TDA11P38854 COS5YJR161C 1152 nt3.89□□□□□ -1.79
TDA11P38854 YKR075CYKR075C 924 nt3.89□□□□□ -1.79
TDA11P38854 VPS71YML041C 843 nt3.89□□□□□ -1.79
TDA11P38854 TPP1YMR156C 717 nt3.89□□□□□ -1.79
TDA11P38854 MRPS9YBR146W 837 nt3.89□□□□□ -1.79
TDA11P38854 SOF1YLL011W 1470 nt3.89□□□□□ -1.79
TDA11P38854 GIP4YAL031C 2283 nt3.89□□□□□ -1.79
TDA11P38854 GDH2YDL215C 3279 nt3.89□□□□□ -1.79
TDA11P38854 FOX2YKR009C 2703 nt3.89□□□□□ -1.79
TDA11P38854 ADY3YDL239C 2373 nt3.89□□□□□ -1.79
TDA11P38854 ALG11YNL048W 1647 nt3.88□□□□□ -1.79
TDA11P38854 IOC4YMR044W 1428 nt3.88□□□□□ -1.79
TDA11P38854 KIN2YLR096W 3444 nt3.88□□□□□ -1.79
TDA11P38854 CNA1YLR433C 1662 nt3.88□□□□□ -1.79
TDA11P38854 ALG9YNL219C 1668 nt3.88□□□□□ -1.79
TDA11P38854 AIM7YDR063W 450 nt3.88□□□□□ -1.79
TDA11P38854 CAF16YFL028C 870 nt3.88□□□□□ -1.79
TDA11P38854 RPS4BYHR203C 786 nt3.88□□□□□ -1.79
TDA11P38854 GVP36YIL041W 981 nt3.88□□□□□ -1.79
TDA11P38854 RPS4AYJR145C 786 nt3.88□□□□□ -1.79
TDA11P38854 YBR134WYBR134W 402 nt3.88□□□□□ -1.79
TDA11P38854 RER1YCL001W 567 nt3.88□□□□□ -1.79
TDA11P38854 KRI1YNL308C 1776 nt3.88□□□□□ -1.79
TDA11P38854 MNT4YNR059W 1743 nt3.87□□□□□ -1.79
TDA11P38854 RCM1YNL022C 1473 nt3.87□□□□□ -1.79
TDA11P38854 YCR050CYCR050C 309 nt3.87□□□□□ -1.79
TDA11P38854 CMR3YPR013C 954 nt3.87□□□□□ -1.79
TDA11P38854 RAD26YJR035W 3258 nt3.87□□□□□ -1.79
TDA11P38854 DPB4YDR121W 591 nt3.86□□□□□ -1.79
TDA11P38854 REC104YHR157W 549 nt3.86□□□□□ -1.79
TDA11P38854 SRN2YLR119W 642 nt3.86□□□□□ -1.79
TDA11P38854 YLR402WYLR402W 192 nt3.86□□□□□ -1.79
TDA11P38854 ANT1YPR128C 987 nt3.86□□□□□ -1.79
TDA11P38854 PUT2YHR037W 1728 nt3.86□□□□□ -1.79
TDA11P38854 NGL3YML118W 1518 nt3.85□□□□□ -1.79
TDA11P38854 RDH54YBR073W 2877 nt3.85□□□□□ -1.79
TDA11P38854 ARX1YDR101C 1782 nt3.85□□□□□ -1.79
TDA11P38854 DCS2YOR173W 1062 nt3.85□□□□□ -1.79
TDA11P38854 OSH3YHR073W 2991 nt3.85□□□□□ -1.79
TDA11P38854 UGA3YDL170W 1587 nt3.85□□□□□ -1.79
TDA11P38854 MTR10YOR160W 2919 nt3.84□□□□□ -1.79
TDA11P38854 PTC1YDL006W 846 nt3.84□□□□□ -1.79
TDA11P38854 PIC2YER053C 903 nt3.84□□□□□ -1.79
TDA11P38854 YGL074CYGL074C 327 nt3.84□□□□□ -1.79
TDA11P38854 YHB1YGR234W 1200 nt3.84□□□□□ -1.79
TDA11P38854 MIC26YGR235C 702 nt3.84□□□□□ -1.79
TDA11P38854 ECM34YHL043W 513 nt3.84□□□□□ -1.79
TDA11P38854 RPB3YIL021W 957 nt3.84□□□□□ -1.79
TDA11P38854 YIL047C-AYIL047C-A 369 nt3.84□□□□□ -1.79
TDA11P38854 UTP11YKL099C 753 nt3.84□□□□□ -1.79
TDA11P38854 UPS2YLR168C 693 nt3.84□□□□□ -1.79
TDA11P38854 IBD2YNL164C 1056 nt3.84□□□□□ -1.79
TDA11P38854 PHM7YOL084W 2976 nt3.84□□□□□ -1.79
TDA11P38854 FDH1YOR388C 1131 nt3.84□□□□□ -1.79
TDA11P38854 RNY1YPL123C 1305 nt3.84□□□□□ -1.79
TDA11P38854 TMA17YDL110C 453 nt3.83□□□□□ -1.8
TDA11P38854 BUR6YER159C 429 nt3.83□□□□□ -1.8
TDA11P38854 COX4YGL187C 468 nt3.83□□□□□ -1.8
TDA11P38854 CAP2YIL034C 864 nt3.83□□□□□ -1.8
TDA11P38854 JLP1YLL057C 1239 nt3.83□□□□□ -1.8
TDA11P38854 YLR462WYLR462W 609 nt3.83□□□□□ -1.8
TDA11P38854 YML031C-AYML031C-A 336 nt3.83□□□□□ -1.8
TDA11P38854 MRPL3YMR024W 1173 nt3.83□□□□□ -1.8
Retrieved 100 of 7,029 protein–RNA pairs in 18.7 ms