Protein–RNA interactions for Protein: P25846

MSH1, DNA mismatch repair protein MSH1, mitochondrial, yeastyeast

Predictions only

Length 959 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH1P25846 TRM1YDR120C 1713 nt4.86□□□□□ -1.63
MSH1P25846 IKS1YJL057C 2004 nt4.85□□□□□ -1.63
MSH1P25846 CDC15YAR019C 2925 nt4.85□□□□□ -1.63
MSH1P25846 NUS1YDL193W 1128 nt4.85□□□□□ -1.63
MSH1P25846 YDR124WYDR124W 975 nt4.85□□□□□ -1.63
MSH1P25846 CTH1YDR151C 978 nt4.85□□□□□ -1.63
MSH1P25846 BET1YIL004C 429 nt4.85□□□□□ -1.63
MSH1P25846 AAD10YJR155W 867 nt4.85□□□□□ -1.63
MSH1P25846 ERV41YML067C 1059 nt4.85□□□□□ -1.63
MSH1P25846 MDJ2YNL328C 441 nt4.85□□□□□ -1.63
MSH1P25846 YPL077CYPL077C 723 nt4.85□□□□□ -1.63
MSH1P25846 YBR089WYBR089W 600 nt4.85□□□□□ -1.63
MSH1P25846 BMT2YBR141C 1014 nt4.85□□□□□ -1.63
MSH1P25846 POL31YJR006W 1464 nt4.85□□□□□ -1.63
MSH1P25846 NAM9YNL137C 1461 nt4.85□□□□□ -1.63
MSH1P25846 BUD7YOR299W 2241 nt4.84□□□□□ -1.63
MSH1P25846 YCR023CYCR023C 1836 nt4.84□□□□□ -1.63
MSH1P25846 RRB1YMR131C 1536 nt4.84□□□□□ -1.63
MSH1P25846 COT1YOR316C 1320 nt4.84□□□□□ -1.63
MSH1P25846 YCL068CYCL068C 783 nt4.84□□□□□ -1.63
MSH1P25846 MRPL32YCR003W 552 nt4.84□□□□□ -1.63
MSH1P25846 RPL43BYJR094W-A 279 nt4.84□□□□□ -1.63
MSH1P25846 YAL044W-AYAL044W-A 333 nt4.84□□□□□ -1.63
MSH1P25846 MTD1YKR080W 963 nt4.84□□□□□ -1.63
MSH1P25846 ATG16YMR159C 453 nt4.84□□□□□ -1.63
MSH1P25846 PRX1YBL064C 786 nt4.84□□□□□ -1.63
MSH1P25846 SLZ1YNL196C 897 nt4.84□□□□□ -1.63
MSH1P25846 PNT1YOR266W 1272 nt4.84□□□□□ -1.63
MSH1P25846 YCF1YDR135C 4548 nt4.84□□□□□ -1.63
MSH1P25846 MSE1YOL033W 1611 nt4.83□□□□□ -1.64
MSH1P25846 YMR111CYMR111C 1389 nt4.83□□□□□ -1.64
MSH1P25846 RRP8YDR083W 1179 nt4.83□□□□□ -1.64
MSH1P25846 PAD1YDR538W 729 nt4.83□□□□□ -1.64
MSH1P25846 FSH1YHR049W 732 nt4.83□□□□□ -1.64
MSH1P25846 YLR198CYLR198C 360 nt4.83□□□□□ -1.64
MSH1P25846 SHE1YBL031W 1017 nt4.83□□□□□ -1.64
MSH1P25846 YBL059WYBL059W 582 nt4.83□□□□□ -1.64
MSH1P25846 YPR142CYPR142C 564 nt4.83□□□□□ -1.64
MSH1P25846 SEN1YLR430W 6696 nt4.83□□□□□ -1.64
MSH1P25846 HFA1YMR207C 6372 nt4.83□□□□□ -1.64
MSH1P25846 SBE2YDR351W 2595 nt4.83□□□□□ -1.64
MSH1P25846 TPO2YGR138C 1845 nt4.83□□□□□ -1.64
MSH1P25846 DRN1YGR093W 1524 nt4.82□□□□□ -1.64
MSH1P25846 HRR25YPL204W 1485 nt4.82□□□□□ -1.64
MSH1P25846 LAS21YJL062W 2493 nt4.82□□□□□ -1.64
MSH1P25846 YCL076WYCL076W 744 nt4.82□□□□□ -1.64
MSH1P25846 LPP1YDR503C 825 nt4.82□□□□□ -1.64
MSH1P25846 YFR045WYFR045W 930 nt4.82□□□□□ -1.64
MSH1P25846 YRA2YKL214C 612 nt4.82□□□□□ -1.64
MSH1P25846 YAL069WYAL069W 315 nt4.82□□□□□ -1.64
MSH1P25846 YLR042CYLR042C 486 nt4.82□□□□□ -1.64
MSH1P25846 RPS1BYML063W 768 nt4.82□□□□□ -1.64
MSH1P25846 CDC48YDL126C 2508 nt4.82□□□□□ -1.64
MSH1P25846 SPO1YNL012W 1896 nt4.81□□□□□ -1.64
MSH1P25846 MSA1YOR066W 1890 nt4.81□□□□□ -1.64
MSH1P25846 SER33YIL074C 1410 nt4.81□□□□□ -1.64
MSH1P25846 GZF3YJL110C 1656 nt4.81□□□□□ -1.64
MSH1P25846 YCR075W-AYCR075W-A 228 nt4.81□□□□□ -1.64
MSH1P25846 YGR269WYGR269W 327 nt4.81□□□□□ -1.64
MSH1P25846 YJL028WYJL028W 336 nt4.81□□□□□ -1.64
MSH1P25846 MFM1YPL060W 1242 nt4.81□□□□□ -1.64
MSH1P25846 TDA3YHR009C 1572 nt4.81□□□□□ -1.64
MSH1P25846 RAD30YDR419W 1899 nt4.81□□□□□ -1.64
MSH1P25846 STB3YDR169C 1542 nt4.81□□□□□ -1.64
MSH1P25846 CDC6YJL194W 1542 nt4.81□□□□□ -1.64
MSH1P25846 MGR3YMR115W 1506 nt4.81□□□□□ -1.64
MSH1P25846 APC1YNL172W 5247 nt4.81□□□□□ -1.64
MSH1P25846 FAR10YLR238W 1437 nt4.8□□□□□ -1.64
MSH1P25846 YCR015CYCR015C 954 nt4.8□□□□□ -1.64
MSH1P25846 snR7-SsnR7-S 179 nt4.8□□□□□ -1.64
MSH1P25846 YDR056CYDR056C 618 nt4.8□□□□□ -1.64
MSH1P25846 ARG3YJL088W 1017 nt4.8□□□□□ -1.64
MSH1P25846 RFU1YLR073C 603 nt4.8□□□□□ -1.64
MSH1P25846 CDC42YLR229C 576 nt4.8□□□□□ -1.64
MSH1P25846 MDM12YOL009C 816 nt4.8□□□□□ -1.64
MSH1P25846 RRN11YML043C 1524 nt4.8□□□□□ -1.64
MSH1P25846 NOP8YOL144W 1455 nt4.8□□□□□ -1.64
MSH1P25846 VID28YIL017C 2766 nt4.8□□□□□ -1.64
MSH1P25846 SWC3YAL011W 1878 nt4.79□□□□□ -1.64
MSH1P25846 ORC6YHR118C 1308 nt4.79□□□□□ -1.64
MSH1P25846 YDR391CYDR391C 699 nt4.79□□□□□ -1.64
MSH1P25846 YIL025CYIL025C 375 nt4.79□□□□□ -1.64
MSH1P25846 ARC15YIL062C 465 nt4.79□□□□□ -1.64
MSH1P25846 YAR019W-AYAR019W-A 333 nt4.79□□□□□ -1.64
MSH1P25846 YAR030CYAR030C 342 nt4.79□□□□□ -1.64
MSH1P25846 GAT2YMR136W 1683 nt4.79□□□□□ -1.64
MSH1P25846 SAC1YKL212W 1872 nt4.79□□□□□ -1.64
MSH1P25846 CDC9YDL164C 2268 nt4.78□□□□□ -1.64
MSH1P25846 UBI4YLL039C 1146 nt4.78□□□□□ -1.64
MSH1P25846 RNA1YMR235C 1224 nt4.78□□□□□ -1.64
MSH1P25846 YNL144W-AYNL144W-A 84 nt4.78□□□□□ -1.64
MSH1P25846 YBR016WYBR016W 387 nt4.78□□□□□ -1.64
MSH1P25846 MUM2YBR057C 1101 nt4.78□□□□□ -1.64
MSH1P25846 SUA7YPR086W 1038 nt4.78□□□□□ -1.64
MSH1P25846 PEX34YCL056C 435 nt4.78□□□□□ -1.64
MSH1P25846 MCM2YBL023C 2607 nt4.77□□□□□ -1.65
MSH1P25846 KEX1YGL203C 2190 nt4.77□□□□□ -1.65
MSH1P25846 APC4YDR118W 1959 nt4.77□□□□□ -1.65
MSH1P25846 NOP16YER002W 696 nt4.77□□□□□ -1.65
MSH1P25846 SAE3YHR079C-A 276 nt4.77□□□□□ -1.65
Retrieved 100 of 7,029 protein–RNA pairs in 13.8 ms