Protein–RNA interactions for Protein: P23246

SFPQ, Splicing factor, proline- and glutamine-rich, humanhuman

Known RBP eCLIP

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQP23246 SLC2A14-209ENST00000536594 543 ntTSL 54.99□□□□□ -1.616e-7■■□□□ 12.2
SFPQP23246 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC23.54■■□□□ 1.367e-11■■□□□ 12.2
SFPQP23246 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.227e-11■■□□□ 12.2
SFPQP23246 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC22.42■■□□□ 1.187e-11■■□□□ 12.2
SFPQP23246 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.899e-7■■□□□ 12.2
SFPQP23246 CLUH-213ENST00000576309 433 ntTSL 319.02■□□□□ 0.649e-7■■□□□ 12.2
SFPQP23246 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC18.91■□□□□ 0.629e-7■■□□□ 12.2
SFPQP23246 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC17.66■□□□□ 0.427e-11■■□□□ 12.2
SFPQP23246 CLUH-210ENST00000574426 3844 ntAPPRIS ALT2 TSL 517.3■□□□□ 0.369e-7■■□□□ 12.2
SFPQP23246 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.177e-11■■□□□ 12.2
SFPQP23246 CLUH-214ENST00000576885 583 ntTSL 316.07■□□□□ 0.169e-7■■□□□ 12.2
SFPQP23246 DLGAP4-214ENST00000491207 469 ntTSL 415.81■□□□□ 0.127e-11■■□□□ 12.2
SFPQP23246 DLGAP4-211ENST00000482037 603 ntTSL 514.7□□□□□ -0.067e-11■■□□□ 12.2
SFPQP23246 DLGAP4-212ENST00000482872 839 ntTSL 514.29□□□□□ -0.127e-11■■□□□ 12.2
SFPQP23246 DLGAP4-203ENST00000373907 3337 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.157e-11■■□□□ 12.2
SFPQP23246 CLUH-204ENST00000571566 545 ntTSL 413.74□□□□□ -0.219e-7■■□□□ 12.2
SFPQP23246 DLGAP4-215ENST00000495241 794 ntTSL 212.45□□□□□ -0.427e-11■■□□□ 12.2
SFPQP23246 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.545e-7■■□□□ 12.2
SFPQP23246 FOXK2-202ENST00000473637 3462 ntTSL 1 (best)22.13■■□□□ 1.135e-7■■□□□ 12.2
SFPQP23246 PLD1-215ENST00000497307 1506 ntTSL 220.86■□□□□ 0.938e-7■■□□□ 12.2
SFPQP23246 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC15.54■□□□□ 0.088e-7■■□□□ 12.2
SFPQP23246 PLD1-207ENST00000460926 1012 ntTSL 26.92□□□□□ -1.38e-7■■□□□ 12.2
SFPQP23246 YWHAE-209ENST00000572108 258 ntTSL 311□□□□□ -0.656e-7■■□□□ 12.2
SFPQP23246 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.321e-6■■□□□ 12.2
SFPQP23246 FCHSD2-206ENST00000422375 587 ntTSL 413.75□□□□□ -0.211e-6■■□□□ 12.2
SFPQP23246 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC8.27□□□□□ -1.091e-6■■□□□ 12.2
SFPQP23246 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC7.45□□□□□ -1.221e-6■■□□□ 12.2
SFPQP23246 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC6.5□□□□□ -1.371e-6■■□□□ 12.2
SFPQP23246 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC5.15□□□□□ -1.581e-6■■□□□ 12.2
SFPQP23246 HLF-207ENST00000573422 493 ntTSL 412.56□□□□□ -0.44e-8■■□□□ 12.2
SFPQP23246 HLF-206ENST00000573020 414 ntTSL 49.48□□□□□ -0.894e-8■■□□□ 12.2
SFPQP23246 HLF-211ENST00000575868 558 ntTSL 45.22□□□□□ -1.574e-8■■□□□ 12.2
SFPQP23246 ZNF518A-205ENST00000488700 729 ntTSL 219.62■□□□□ 0.734e-9■■□□□ 12.2
SFPQP23246 ZNF518A-201ENST00000316045 7277 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.794e-9■■□□□ 12.2
SFPQP23246 ZNF518A-208ENST00000563195 1594 ntTSL 38.39□□□□□ -1.074e-9■■□□□ 12.2
SFPQP23246 ZNF518A-207ENST00000539666 485 ntTSL 46.4□□□□□ -1.384e-9■■□□□ 12.2
SFPQP23246 ZNF518A-203ENST00000478086 1579 ntTSL 1 (best)3.92□□□□□ -1.784e-9■■□□□ 12.2
SFPQP23246 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.214e-9■■□□□ 12.2
SFPQP23246 SPTBN1-202ENST00000356805 8482 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.263e-7■■□□□ 12.2
SFPQP23246 SPTBN1-203ENST00000389980 2164 ntTSL 1 (best)13.41□□□□□ -0.263e-7■■□□□ 12.2
SFPQP23246 SPTBN1-207ENST00000615901 10226 ntTSL 5 BASIC10.61□□□□□ -0.713e-7■■□□□ 12.2
SFPQP23246 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.562e-6■■□□□ 12.1
SFPQP23246 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC16.31■□□□□ 0.22e-6■■□□□ 12.1
SFPQP23246 SAMD4A-207ENST00000555112 2287 ntTSL 1 (best)24.81■■□□□ 1.563e-6■■□□□ 12.1
SFPQP23246 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.613e-6■■□□□ 12.1
SFPQP23246 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC15.94■□□□□ 0.143e-6■■□□□ 12.1
SFPQP23246 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.083e-6■■□□□ 12.1
SFPQP23246 SAMD4A-201ENST00000251091 6565 ntTSL 1 (best) BASIC15.12■□□□□ 0.013e-6■■□□□ 12.1
SFPQP23246 ASPSCR1-205ENST00000578236 3277 ntTSL 215.62■□□□□ 0.092e-12■■□□□ 12.1
SFPQP23246 FOXK2-204ENST00000527313 779 ntTSL 322.63■■□□□ 1.216e-7■■□□□ 12.1
SFPQP23246 FOXK2-207ENST00000570585 756 ntTSL 315.46■□□□□ 0.076e-7■■□□□ 12.1
SFPQP23246 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.082e-7■■□□□ 12.1
SFPQP23246 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC21.03■□□□□ 0.964e-6■■□□□ 12.1
SFPQP23246 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC20.72■□□□□ 0.914e-6■■□□□ 12.1
SFPQP23246 MTA1-208ENST00000438610 2144 ntTSL 1 (best)20.42■□□□□ 0.864e-6■■□□□ 12.1
SFPQP23246 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC18.33■□□□□ 0.524e-6■■□□□ 12.1
SFPQP23246 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.364e-6■■□□□ 12.1
SFPQP23246 MTA1-219ENST00000551236 461 ntTSL 313.46□□□□□ -0.254e-6■■□□□ 12.1
SFPQP23246 TEX22-202ENST00000548638 508 ntTSL 513.25□□□□□ -0.294e-6■■□□□ 12.1
SFPQP23246 LARP1-215ENST00000524248 2128 ntTSL 519.75■□□□□ 0.753e-6■■□□□ 12.1
SFPQP23246 TBL1XR1-201ENST00000352800 611 ntTSL 523.81■■□□□ 1.42e-6■■□□□ 12.1
SFPQP23246 TBL1XR1-204ENST00000422442 564 ntTSL 520.91■□□□□ 0.942e-6■■□□□ 12.1
SFPQP23246 TBL1XR1-203ENST00000422066 604 ntTSL 419.91■□□□□ 0.782e-6■■□□□ 12.1
SFPQP23246 TBL1XR1-209ENST00000431421 550 ntTSL 419.91■□□□□ 0.782e-6■■□□□ 12.1
SFPQP23246 TBL1XR1-225ENST00000636187 171 ntTSL 519.71■□□□□ 0.752e-6■■□□□ 12.1
SFPQP23246 TBL1XR1-219ENST00000627825 312 ntTSL 519.15■□□□□ 0.662e-6■■□□□ 12.1
SFPQP23246 TBL1XR1-217ENST00000626672 568 ntTSL 418.63■□□□□ 0.572e-6■■□□□ 12.1
SFPQP23246 TBL1XR1-202ENST00000413084 592 ntTSL 418.42■□□□□ 0.542e-6■■□□□ 12.1
SFPQP23246 TBL1XR1-206ENST00000427349 554 ntTSL 318.42■□□□□ 0.542e-6■■□□□ 12.1
SFPQP23246 TBL1XR1-210ENST00000431674 559 ntTSL 417.87■□□□□ 0.452e-6■■□□□ 12.1
SFPQP23246 TBL1XR1-213ENST00000450267 588 ntTSL 317.72■□□□□ 0.432e-6■■□□□ 12.1
SFPQP23246 TBL1XR1-214ENST00000457928 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.372e-6■■□□□ 12.1
SFPQP23246 TBL1XR1-207ENST00000428970 575 ntTSL 410.98□□□□□ -0.652e-6■■□□□ 12.1
SFPQP23246 TBL1XR1-231ENST00000637137 107 ntTSL 58.16□□□□□ -1.12e-6■■□□□ 12.1
SFPQP23246 TBL1XR1-211ENST00000437738 565 ntTSL 58.08□□□□□ -1.122e-6■■□□□ 12.1
SFPQP23246 TBL1XR1-205ENST00000424913 592 ntTSL 47.74□□□□□ -1.172e-6■■□□□ 12.1
SFPQP23246 TBL1XR1-220ENST00000630796 656 ntTSL 57.72□□□□□ -1.172e-6■■□□□ 12.1
SFPQP23246 TBL1XR1-224ENST00000635794 768 ntTSL 55.85□□□□□ -1.472e-6■■□□□ 12.1
SFPQP23246 TBL1XR1-212ENST00000443315 580 ntTSL 44.87□□□□□ -1.632e-6■■□□□ 12.1
SFPQP23246 TBL1XR1-221ENST00000630833 567 ntTSL 44.74□□□□□ -1.652e-6■■□□□ 12.1
SFPQP23246 TBL1XR1-216ENST00000491623 582 ntTSL 54.6□□□□□ -1.672e-6■■□□□ 12.1
SFPQP23246 TBL1XR1-232ENST00000637544 214 ntTSL 52.64□□□□□ -1.992e-6■■□□□ 12.1
SFPQP23246 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.072e-6■■□□□ 12.1
SFPQP23246 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC20.58■□□□□ 0.891e-6■■□□□ 12.1
SFPQP23246 DNAJB6-212ENST00000465908 694 ntTSL 317.95■□□□□ 0.461e-6■■□□□ 12.1
SFPQP23246 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC17.65■□□□□ 0.421e-6■■□□□ 12.1
SFPQP23246 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.21e-6■■□□□ 12.1
SFPQP23246 DNAJB6-211ENST00000459889 7992 ntTSL 1 (best)15.77■□□□□ 0.121e-6■■□□□ 12.1
SFPQP23246 CMIP-202ENST00000537098 4357 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.19e-7■■□□□ 12
SFPQP23246 PVT1-203ENST00000513868 1699 ntTSL 1 (best) BASIC14.2□□□□□ -0.142e-6■■□□□ 12
SFPQP23246 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC15.95■□□□□ 0.146e-7■■□□□ 12
SFPQP23246 ZNF516-202ENST00000532857 482 ntTSL 219.52■□□□□ 0.724e-6■■□□□ 12
SFPQP23246 CRIM1-203ENST00000426856 667 ntTSL 317.08■□□□□ 0.322e-7■■□□□ 12
SFPQP23246 HDLBP-218ENST00000441124 708 ntTSL 220.88■□□□□ 0.931e-6■■□□□ 12
SFPQP23246 HDLBP-204ENST00000391976 4489 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.031e-6■■□□□ 12
SFPQP23246 HDLBP-210ENST00000423693 544 ntTSL 514.35□□□□□ -0.111e-6■■□□□ 12
SFPQP23246 HDLBP-246ENST00000496569 374 ntTSL 413.61□□□□□ -0.231e-6■■□□□ 12
SFPQP23246 HDLBP-207ENST00000420451 559 ntTSL 411.96□□□□□ -0.491e-6■■□□□ 12
SFPQP23246 HDLBP-205ENST00000413241 581 ntTSL 511.41□□□□□ -0.581e-6■■□□□ 12
SFPQP23246 HDLBP-206ENST00000417540 525 ntTSL 411.38□□□□□ -0.591e-6■■□□□ 12
Retrieved 100 of 4,991 protein–RNA pairs in 164 ms